| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3612 |
|---|
| Symbol | |
|---|
| ID | 7873117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3968174 |
|---|
| End bp | 3969733 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643700552 |
|---|
| Product | alkyl hydroperoxide reductase, F subunit |
|---|
| Protein accession | YP_002890582 |
|---|
| Protein GI | 237654268 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
|---|
| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGACG CCAACATCAA GACTCAACTG AAAGCCTACC TGGAGCGGGT GACGCAGCCG
ATCGAGATCG TGGCGTCGCT GGATGATGGT CCGAAGTCGA AGGAACTGCT CGAGCTGCTG
CACGACGTCA CCGAGCAGTC GAAGCTGATC ACCCTGGTCG AGCGTCGCGA TGACGACGAA
CGCAAGCCCT CGTTCTCGGT CGGACCGCGC GGCGGCGAGG CGCGCGTGCG CTTCGCAGGC
CTGCCCATGG GCCACGAGTT CACCTCGCTG ATCCTCGCCC TGCTGCAGGC CGGCGGCTAC
CCGCCCAAGG TCGAGGCCGA GGTGATCGAG CAGATCAGGA ACCTCGACGT CGAGCTGAAC
TTCGAGACCT ACATCTCGCT GTCCTGCCAC AACTGCCCGG ACGTGGTGCA GGCGCTCAAC
CTGATGGCGG TGCTCAACCC GAAGATCCGC CACACCATGA TCGATGGCGC GCTGTTCCAG
AAGGAAGTCG AGGAGCGCCA GATCATGGCG GTGCCGACGG TGTACCTGAA CGGCGAGGAG
TTCGACCAGG GCCGCCTCGA GCTCGGCCAG ATCCTCGCCA AGGTCGACAC CGGCGCCGCG
GCGCGCGACG CCAGGAAGCT CTCCGAGAAG CCGGCCTTCG ACGTGCTCGT CGTGGGGGGC
GGACCGGCCG GCGCGGCGGC GGCGATCTAC GCCGCGCGCA AGGGCATCCG CACCGGCGTG
GTGGCCGAGC GCTTCGGCGG CCAGGTCATG GACACGCTGG CGATCGAGAA CTTCATCTCG
GTGAAGTACA CCGAAGGCCC CAAGCTGGTC GCCAGCCTGG AGGAGCACGT CAAGGAATAC
GAAGTCGACG TCATGAACCT GCAGCGCGTT GCCGGCGTGG TGCCGGGCGA GAACCTGCAC
GAGGTGAAGA TGGAGAACGG CGCCAGCCTC AAGGCCAAGA CCGTGATCGT CGCCACCGGT
GCGCGCTGGC GCGAGATGAA CGTGCCCGGC GAGAAGGAGT TCCGCGGCAA GGGCGTGGCC
TACTGCCCGC ACTGCGACGG CCCGCTGTTC AAGGGCAAGC GCGTGGCGGT GATCGGCGGC
GGCAACTCCG GCGTCGAGGC CGCGATCGAC CTCGCCGGCG TGGTCGCCCA CGTGACCCTG
CTCGAGTTCG CCGACGACCT GCGCGCCGAC GCCGTGCTGC AGAAGAAGCT CTACAGCCTG
CCCAACGTCA GCGTGATCAA GAGCGCGCAG ACCACCGAGG TCACCGGTGC CGACAAGGTG
AATGGCCTGG TGTACAAGGA TCGCAAGACC AACGCCGAGC ACCGTCTCGA GCTCGAAGGC
ATCTTCGTGC AGATCGGCCT GCTGCCCAAC ACCGACTTCC TCAGGGGCAC GCTCGAACTG
TCGCGCTTCG GCGAGGTGAT CGTGGACGCC AAGGGCCAGA CCTCGGTGCC GGGCATCTTC
GCCGCCGGCG ACTGCACCAC GGTGCCGTAC AAGCAGATCA TCATCGCCAT GGGCGAAGGT
GCCAAGGCTT CGCTGTCCGC CTTCGACCAC CTGATCCGCA GCAGCGCGCC GACCATGTAA
|
|---|
| Protein sequence | MLDANIKTQL KAYLERVTQP IEIVASLDDG PKSKELLELL HDVTEQSKLI TLVERRDDDE
RKPSFSVGPR GGEARVRFAG LPMGHEFTSL ILALLQAGGY PPKVEAEVIE QIRNLDVELN
FETYISLSCH NCPDVVQALN LMAVLNPKIR HTMIDGALFQ KEVEERQIMA VPTVYLNGEE
FDQGRLELGQ ILAKVDTGAA ARDARKLSEK PAFDVLVVGG GPAGAAAAIY AARKGIRTGV
VAERFGGQVM DTLAIENFIS VKYTEGPKLV ASLEEHVKEY EVDVMNLQRV AGVVPGENLH
EVKMENGASL KAKTVIVATG ARWREMNVPG EKEFRGKGVA YCPHCDGPLF KGKRVAVIGG
GNSGVEAAID LAGVVAHVTL LEFADDLRAD AVLQKKLYSL PNVSVIKSAQ TTEVTGADKV
NGLVYKDRKT NAEHRLELEG IFVQIGLLPN TDFLRGTLEL SRFGEVIVDA KGQTSVPGIF
AAGDCTTVPY KQIIIAMGEG AKASLSAFDH LIRSSAPTM
|
|---|
| |