| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3610 |
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| Symbol | |
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| ID | 7873115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3964337 |
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| End bp | 3966088 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643700550 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002890580 |
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| Protein GI | 237654266 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGG AGTCCGCATC CGGCGATGCG CATCCCCTGC GCGTCGTCGC GCTCATCTAC
CTCTGCGGCG CGCTGCTGTT CGGAACGTTG CTGGTGCTCG AATGGCGGCT GATCGACCGC
AGCGTCGTCG CGATCGCCCG CGAACGCGGT GCGGCGCTGT TCTCGCTGAT CCAGACCACC
CGCGAGTGGA ACGCCAGGCA TGGCGGGGTG TATGTCGTGG TGGACGAGAG CACCCAGCCG
AACCCTTGGC TGAAGCACCC GGCGCGCGAC CTGCAGACCA CCGACGGCGT GCGCCTGACC
ATGGTCAACC CGGCCTACAT GACGCGGCAG ATCGCCGACC TCGCCCTGCA CGCGGAGGGC
GCGCGCCTGC ACCTCACCAG CCTCAAGCCG ATCCGACCCG AGAACCGTCC CGACGCCTGG
GAGGCGATGG CGCTCGCGCG ATTCGAGGCC GGCGAGACCG AGGTGCTGGC GCTGGTGGAG
GGCGGCGGCG AGGGCGGAAG CGGCCCGGCG CATCGCTACA TGGCACCCTT GCTGGTGCGC
GAGCCCTGCC TGCAGTGTCA TGCAGAGCAG GGTTACCAGG TGGGAGACAT CCGCGGCGGC
ATCTCGGTGA CGATGCCTGC CGAGGTGCTG ATCGCCCGGC GCGATCAGCT GCGCATGCGC
GCGGTCTTCG TCTATCTGCT CGCCGGGCTG CTCGCCGCCG GCCTGATGCA CGGCCTGCTG
CGTGCCAACC GGCGCCATGT CGTCCAGGTG CGGCGGATCA ACGCCGAGCA GGAGCGTCTG
ATCGAGCGGC GCACCGTCGA ACTCGCCGAG GCCAACCGCC GCCTCGCCGG GGAGGTCGAC
CTGCACCGGC GCAGCGAGCA GCGCCTGGCG GCGAGCGAGT CGCGCTACCG CGCGATCTTC
GACAGTGCCG CCGAGGGCAT CATGCTGCTC GACGCCGCGC TGCGCATCGT CCAGGTGAAC
CCCGCCTTCT GCGAAATCAC CGGCTACGCG GCCGAAGAAG TCCTCGGCCG CAAGCCGTCC
ATGCTCGGCT CGGGGCGCCA CGACCGGGCC TTCTTCCGCG AGCTCCTCGC CACGCTGGCC
GCCGCCGGAC GCTGGCAGGG CGAGGTATGG AACCGGCGCA AGGACGGCGA CCTGTACGTG
CAGTGGATGT CGGCGGTGCG GATCGGCGAG GCCGACGCGC CCGAGGGCTT CGTCGCCACG
ATGACCGACA TCACCTCGCG CAAGCAGACC GAGGAGAAGC TGCGCTTCCG CGCCAACCAC
GACGCGCTCA CCGGCCTGCC CAACCGCCGC CTGTTCGAGG ATCGGCTGCA GTCGGCGATC
GCCAGCGCGC TACGCCATGG CGAGCGTTTC GCGCTGATGC TGGTCGACCT CGACCACTTC
AAGGGCGTCA ATGACCGCTT CGGCCACCTC GCCGGCGACG CGCTGCTGGT CGAGGTCGGC
CGCCGCCTGG AACTGTGCGT GCGCGCCTCC GACACGGTGG CGCGCCTGGG CGGCGACGAG
TTCGCGGTGA TCCTCGGCGA GGTCGGCGGC CGCGAGGATG CCGCCGAGGT GGCCGAGCGC
ATCTGCGCCG CCATGGCCTT GCCCTTCGAG CTCGGCGAGG GCGTCGCGCA CATCGGCGCC
TCGGTCGGCA TCGCCCTCGG TCCGCAGGAC GACGCCGACG CCGGGGAACT GCAGCGCCGC
GCGGACGCCG CGCTCTATGC CGTCAAGCAC GATGGCCGCG GCGGCTTCCG CTTCCACGGC
GAGCCGGCCT GA
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| Protein sequence | MASESASGDA HPLRVVALIY LCGALLFGTL LVLEWRLIDR SVVAIARERG AALFSLIQTT
REWNARHGGV YVVVDESTQP NPWLKHPARD LQTTDGVRLT MVNPAYMTRQ IADLALHAEG
ARLHLTSLKP IRPENRPDAW EAMALARFEA GETEVLALVE GGGEGGSGPA HRYMAPLLVR
EPCLQCHAEQ GYQVGDIRGG ISVTMPAEVL IARRDQLRMR AVFVYLLAGL LAAGLMHGLL
RANRRHVVQV RRINAEQERL IERRTVELAE ANRRLAGEVD LHRRSEQRLA ASESRYRAIF
DSAAEGIMLL DAALRIVQVN PAFCEITGYA AEEVLGRKPS MLGSGRHDRA FFRELLATLA
AAGRWQGEVW NRRKDGDLYV QWMSAVRIGE ADAPEGFVAT MTDITSRKQT EEKLRFRANH
DALTGLPNRR LFEDRLQSAI ASALRHGERF ALMLVDLDHF KGVNDRFGHL AGDALLVEVG
RRLELCVRAS DTVARLGGDE FAVILGEVGG REDAAEVAER ICAAMALPFE LGEGVAHIGA
SVGIALGPQD DADAGELQRR ADAALYAVKH DGRGGFRFHG EPA
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