| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3608 |
|---|
| Symbol | |
|---|
| ID | 7873113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3960879 |
|---|
| End bp | 3962075 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643700548 |
|---|
| Product | acetate kinase |
|---|
| Protein accession | YP_002890578 |
|---|
| Protein GI | 237654264 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0282] Acetate kinase |
|---|
| TIGRFAM ID | [TIGR00016] acetate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.880493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCG TCCTCGTCCT CAACGCGGGC TCGTCGAGCC TGAAGTTCGC CCTCTATCCG
CTCGAGGCCT CCAACAGCGG GCGCGTCGCC GCCGCGCCGG CGGTGTCCGG CCAGGTCGAG
GGCATCGGCG CCAGGCCCGA AGTCAGCTTC AAGACCGCCA CCGGCGAGCG CATCCAGGAG
CCCGTCGTCA CCGGCGGCAG TCAGGCTGAG CAGCACCGCG ACGCGCTCGA GCACGTCTTC
GCGCTGCTCG CGCGCCACAA CCCGACGGTC GACATCGTCG CCGCAGGCCA CCGTATCGTG
CATGGGGGCG AGCACTACAG CGCGCCGACC CGGCTCGAGG AGTCGGTGCT GCGCACGCTC
GACGCCTTCG TGCCGCTCGC CCCGCTGCAC CAGCCGCACA ACCTGCGCGC GGTGCGCGCG
GTCGCCGGGC TGATGCCCCA GGTGCCGCAG GTGGGCTGCT TCGACACCGC CTTCCACCGC
ACCCAGCCGG CGGTCGCGCA GGCCTTCGCG CTGCCGCGCA GGCTGTCGGC CGAGGGCATC
AAGCGCTACG GCTTCCACGG CCTGTCCTAC GACTACGTCG CGCGCCAGCT GCCGGAAGTG
GTCGGCGAGC GCGCCCGCGG CGCGGTGGTG ATCGCCCACC TCGGCAACGG CGCGTCGATG
TGCGCGCTGC GCGACGGTCG CAGCGTCGCG TCGACGATGG GCTTCACCGC GGTCGAGGGC
CTGATGATGG GCACCCGCAC CGGCAGCCTC GACCCCGGCG TGATGCTCTA CCTGATGGAG
CAGAAGGGCA TGGACGCCAA GGCGCTCACC AGCCTGCTGT ACAAGGAATC GGGCCTGCTC
GGCGTGTCGG GCATCAGCCA GGACATGCGC ACCCTGCTCG CCTCCGACGC CCCCGAGGCC
AAGGAAGCGG TGGACCTGTT CTGCTACCGC ATCGCGCGCG AGCTCGGCTC GCTGGCTGCG
GCGGCGGGCG GGCTGGACGC GCTGGTGTTC ACCGGCGGCA TCGGCGAGCA CGCCGCGCCG
GTGCGCGAGA AGGTGGCCGC GCTGGCGGCG TGGATGGGCA TCGAGGTCGA CCCCGCCGCC
AACGCCGACC ACGCCCGCCG CATCGACACC GCGGCCAGCC GCGTCGCGGT CGCCGTGGTG
CCGACCAACG AAGAGCGCAT GATCGCGCGC TACACGGCGG AGACGCTGGG GCTGTAG
|
|---|
| Protein sequence | MKAVLVLNAG SSSLKFALYP LEASNSGRVA AAPAVSGQVE GIGARPEVSF KTATGERIQE
PVVTGGSQAE QHRDALEHVF ALLARHNPTV DIVAAGHRIV HGGEHYSAPT RLEESVLRTL
DAFVPLAPLH QPHNLRAVRA VAGLMPQVPQ VGCFDTAFHR TQPAVAQAFA LPRRLSAEGI
KRYGFHGLSY DYVARQLPEV VGERARGAVV IAHLGNGASM CALRDGRSVA STMGFTAVEG
LMMGTRTGSL DPGVMLYLME QKGMDAKALT SLLYKESGLL GVSGISQDMR TLLASDAPEA
KEAVDLFCYR IARELGSLAA AAGGLDALVF TGGIGEHAAP VREKVAALAA WMGIEVDPAA
NADHARRIDT AASRVAVAVV PTNEERMIAR YTAETLGL
|
|---|
| |