Gene Tmz1t_3586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3586 
Symbol 
ID7873091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp3932228 
End bp3932875 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID643700526 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_002890556 
Protein GI237654242 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.63325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC ACACTCCCCT GTCCGATCTG CGCAAGAGCT ACGAACAAGG CACGCTGGAA 
GAGCACGACT CGGCGAGCGA GCCCTCGAGG CAGTTCGAGG CCTGGCTGTC GCAGGCGCTC 
GAGCGCGGGC TGCCCGAACC CAACGCGATG ACCGTGGCCA CCGTCGGCGA GGATGGCCGG 
CCGTCGACCC GGCCGGTGCT GATCAAGGGC TGCGACGCGC GCGGCATCGT GTGGTACTCG 
AACTATCACA GCCGCAAAGG GCGCGAGCTC GAGGTACACC CCTTCGCCGC GCTGCAGTTC 
CACTGGGTGG AGATGGAGCG CGTGGTGCGC ATCGAGGGCC GCGTCGAGAA GGTGTCGGCG 
GAGGAGTCCG ACGCGTACTT CGCCAGCCGT CCGCTCGCCC ACCGCATCGG CGCCTGGGCC 
TCGCCGCAGA GCGAGGTCAT CGACGGGCGT AGCACGATCG TCTCGCGCGC CGCCGAGTAC 
GGCCTCAAGT TCGGTCTCAA CCCGCCGCGC CCGCCGCACT GGGGCGGCTA CCGCCTGGTG 
CCGGACTACT GGGAGTTCTG GCAGGGCCGC AGTTCGCGCC TGCACGACCG CATCGCCTAC 
CGCCTGCAGG CCGACGGCAG CTGGACGCGG CAACGCCTGG CACCGTAG
 
Protein sequence
MSKHTPLSDL RKSYEQGTLE EHDSASEPSR QFEAWLSQAL ERGLPEPNAM TVATVGEDGR 
PSTRPVLIKG CDARGIVWYS NYHSRKGREL EVHPFAALQF HWVEMERVVR IEGRVEKVSA 
EESDAYFASR PLAHRIGAWA SPQSEVIDGR STIVSRAAEY GLKFGLNPPR PPHWGGYRLV 
PDYWEFWQGR SSRLHDRIAY RLQADGSWTR QRLAP