Gene Tmz1t_3524 details

Gene Information

• Locus tag: Tmz1t_3524
• ID: 7873030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 3859986
• End bp: 3862001
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643700465
• Product: ABC transporter related
• Protein accession: YP_002890495
• Protein GI: 237654181
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG AACGCCTTCC CGACGAGGAC GCGACCTCGT CCGCCAGCGC GCGCGCAGCG 
GCCACGCGGC CCGCCGCCCC GCCCACGACC GCAACACCGC TGATCGAGCT CTCGGGCATC 
ACGCGCAGCT TCGTCAATGG CGAGGTCGAG ACCCGCGTGC TGCACGGCAT CGACCTCACC 
ATCCACCCTG GCGAGTTCGT CGCCATCATG GGCACCTCGG GTTCGGGCAA ATCCACGCTG 
ATGAACATCC TCGGCTGCCT CGATCGCCCC ACCGGCGGCA CCTACCGCTT CATGGGCACG 
GACGTCGCGG CGCTGGACCG CGACGCGCTC GCGCGCCTGC GCCGCGAGGC CTTCGGCTTC 
GTCTTCCAGA GCTACAACCT GCTCGGCGGC GCCTCCGCGC GCGACAATGT CGAGGTGCCG 
GCGGTGTATT CCGGCATGCC ACGCGAGGAA CGCCATGCCC GTGCCGAGGC GCTGCTGGCG 
CGCCTCGGGC TCGGCGAGCG CATCCACCAT CGCCCCGGCC AGCTCTCCGG CGGCCAGCAG 
CAGCGCGTGT CGATCGCGCG CGCGCTGATG AACGGCGGCC GCATCATCTT CGCCGACGAG 
CCCACCGGCG CGCTCGACAG CCGAAGCGGC GCCGAGGTCA TGAAGCTGCT CGCCGAGCTC 
TCCGCCGCCG GCCACACCAT CGTGCTGATC ACCCACGAGC GCGAGGTCGC CGAGCAGGCG 
CAGCGCATCA TCGAGATCCG CGACGGCCGC ATCGTCGCCG ACCCCGGGCC GCACCCGCCG 
CAGGAGCCGG AGCCCGACTT CGCCCCCCAC ATCGATCGCA CCTCGCCGCT GTCGGACGTG 
GTGGAGGCCA CCCGCACCGC GCTGCGCGCG CTGCGCGCCA ACCTCTTCCG CACCGTCCTG 
ACCCTGCTCG GCATCGTCAT CGGCGTCGCC TCGGTGATCG CCATGCTGGC GATCGGCGAC 
GGCGCCAAGC AGAAGGTGAT CGACCAGGTC AGCGCGATGG GCACGAACCT GCTCACCGTG 
CGCCCCGGCG CACCCAACAC GCGCGGACGC GACGCCCCCG CCACCCTGGT GATCGAGGAC 
GTGCAGGCGA TCGCCGAGCT GCCCAACGTG CTCGCCTCGG TGCCCGAGCA GGGCGCCACC 
ATCACCCTGC GCGCCGGCAA CATCGACCAC CGCAGCAGCG TCAACGGCAC CTCGGCCGAC 
TACGTCGTGG CGCGCAACTG GCTACCGGCG AGCGGCACCT TCTTCAGCGC GGAGGACGAG 
GCGCGCTACG CCACGGTCGC CGTGCTCGGC CAGACGGTGG CGCGCGCCCT GTTCCCCGGG 
CGCGACGCGG TGGGCGAGTT CATCCTGGTC AACAACATCC CCTTCCAGGT CATGGGCGTG 
ATGACGCCCA AGGGCGCCAC GCCCTGGGGG CAGGACCAGG ACGACATCGT CTTCATGCCC 
TACACCACGG CGAGCCTGCG CATCACCGGC CAGCGATTCC TGCGCAATGT GACCGTGGCG 
GTCGAGGACG TCGGGCAGAT CGACGACACC CAGGCCGCGG TAAGCGCGCT GCTGCTCGCC 
CGCCACGGCG TGGAGGACTT CCAGATCCGC AACATGGCCT CGGTGATCGA TACCGTGTCG 
GAGACGCAGA ACACGCTCAC CGTGCTGCTC GGCACGGTGG CGGCGATCTC GCTGCTGGTG 
GGCGGCATCG GCGTGATGAA CATCATGCTG GTGTCGGTGA CCGAGCGCAC CCGCGAGATC 
GGCATCCGCA TGGCCACCGG TGCACGCACC CGCAACATCC TGCAGCAGTT CCTCATCGAG 
GCCCTGGTGG TGTCGGCGGT GGGCGGGCTG ATCGGGGTCG CGGCCGGGCT CGGCGCCGCC 
GCGATCATCG AGGCCTTCGG CACCGCGGTG CAGTACTCGC TGACGCCGGT CGTGCTCGCC 
TTCAGTTGTG CCTTCCTCAC CGGGCTGGTG TTCGGCTACC TGCCCGCGCG CAAGGCTGCC 
CGACTCGACC CCGTCGTCGC CCTCGCCTCC GAATGA 

 

Protein sequence

MKIERLPDED ATSSASARAA ATRPAAPPTT ATPLIELSGI TRSFVNGEVE TRVLHGIDLT 
IHPGEFVAIM GTSGSGKSTL MNILGCLDRP TGGTYRFMGT DVAALDRDAL ARLRREAFGF 
VFQSYNLLGG ASARDNVEVP AVYSGMPREE RHARAEALLA RLGLGERIHH RPGQLSGGQQ 
QRVSIARALM NGGRIIFADE PTGALDSRSG AEVMKLLAEL SAAGHTIVLI THEREVAEQA 
QRIIEIRDGR IVADPGPHPP QEPEPDFAPH IDRTSPLSDV VEATRTALRA LRANLFRTVL 
TLLGIVIGVA SVIAMLAIGD GAKQKVIDQV SAMGTNLLTV RPGAPNTRGR DAPATLVIED 
VQAIAELPNV LASVPEQGAT ITLRAGNIDH RSSVNGTSAD YVVARNWLPA SGTFFSAEDE 
ARYATVAVLG QTVARALFPG RDAVGEFILV NNIPFQVMGV MTPKGATPWG QDQDDIVFMP 
YTTASLRITG QRFLRNVTVA VEDVGQIDDT QAAVSALLLA RHGVEDFQIR NMASVIDTVS 
ETQNTLTVLL GTVAAISLLV GGIGVMNIML VSVTERTREI GIRMATGART RNILQQFLIE 
ALVVSAVGGL IGVAAGLGAA AIIEAFGTAV QYSLTPVVLA FSCAFLTGLV FGYLPARKAA 
RLDPVVALAS E