Gene Tmz1t_3509 details

Gene Information

• Locus tag: Tmz1t_3509
• ID: 7873015
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 3846381
• End bp: 3847058
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643700450
• Product: protein of unknown function DUF480
• Protein accession: YP_002890480
• Protein GI: 237654166
• COG category: [S] Function unknown
• COG ID: [COG3132] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGACA CGACCCCCAC GACCGAGGCC GGCTTCGACC TCGACCCGGC CGAGATCCGC 
GTGCTCGGCG TGCTGATCGA GAAGTCCTTC ATCACCCCCG ACGCCTATCC GCTGTCGATC 
AACGCCATCA CCACCGGATG CAACCAGCTC ACCGCGCGCG AGCCGGTGAT GAGCCTGTCC 
GAGGCCGAGG TGCAGGACGC GGTCGACCGC CTGATCGCCC GCCGCCTGGT GTCCAAGCGC 
GACCAGCAGA GCGCGCGCGT GGCCAAGTAC GAGCACCTGG TCCGCCTGCG CCACTCGTTG 
CCGCCGGCCG AACAGGCCGT ATTGGCGATC CTGCTGCTGC GCGGCGCGCA GACCGCGGGC 
GAGCTGCGCC AGCGCTGCGA GCGCCTGCAC CGTTTCGACG ACGTCGCCGC GGTCGATGCC 
GTGCTCGAGC ACCTGGCCGA GAAGTACCCG CCGCTGGTCG CCGAGCTGCC GCGTGCGCCC 
GGCACCAAGG AGACCCGCCA CGTTCACCTG CTCGGCGGCG ACGCCGCGGT GCAGGAGATG 
GCCGAGGCGC AGTCCGTCGG CACGGCAGGC GGCGGGCGCG GGCGCATCGG GGAACTCGAG 
GACGAGGTCC GCCGTCTGCG CGAGGAACTC GAGGCACTGC GCGGAGCGTT CGCGGAGTTC 
CGCAAGCAGT TCGACTGA 

 

Protein sequence

MQDTTPTTEA GFDLDPAEIR VLGVLIEKSF ITPDAYPLSI NAITTGCNQL TAREPVMSLS 
EAEVQDAVDR LIARRLVSKR DQQSARVAKY EHLVRLRHSL PPAEQAVLAI LLLRGAQTAG 
ELRQRCERLH RFDDVAAVDA VLEHLAEKYP PLVAELPRAP GTKETRHVHL LGGDAAVQEM 
AEAQSVGTAG GGRGRIGELE DEVRRLREEL EALRGAFAEF RKQFD