| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3446 |
|---|
| Symbol | |
|---|
| ID | 7872952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3769447 |
|---|
| End bp | 3770805 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643700386 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_002890417 |
|---|
| Protein GI | 237654103 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.505848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGA AGATCCTGAT CGCCAACCGC GGGGAAATCG CCCTGCGCAT CCTGCGCGCC
TGCCGCGAAC TCGGCATCAA GACGGTCGCG GTCCACTCCG AGGCCGACAC CCACGCCAAG
TACGTGCGAC TGGCCGACGA GTCCGTTTGC ATCGGCCCGC CGCCCTCTGC GCAGAGCTAC
CTCAACGTGC CGGCCATCAT CTCTGCCGCC GAGGTCACCG ACGCCGAGGC CATCCACCCC
GGCTACGGCT TCCTCTCCGA GAACGCCGAC TTCGGCGAGC GCGTCGAGCA GTCGGGCTTC
GTCTTCATCG GCCCACGCCC CGAGACCATC CGCCTGATGG GCGACAAGGT CTCTGCCAAG
GATGCGATGA AGGCCGCCGG CGTGCCCTGC GTGCCGGGTT CGGACGGCGC ACTGCCCGAG
GATCCGAAGG AGATCGTCAA GATCGCACGC GCGGTCGGCT ACCCGGTGAT CATCAAGGCC
GCCGGCGGCG GCGGCGGGCG CGGCATGCGC GTGGTGCACA CCGAGGCCGC GCTGCTCAAC
GCCGTCACCA CCACCCGCGC CGAGGCCCAG GCGGCCTTCG GCAACCCCGT CGTATACATG
GAGAAGTTCC TCGAGAATCC GCGCCACGTC GAGATCCAGA TCCTTGCCGA CCAGCACGGC
AACGCGGTCT ATCTCGGCGA ACGCGACTGC TCCATGCAGC GCCGCCACCA GAAGGTGATC
GAGGAAGCGC CGGCCCCCGG CATCGACCGC AAGACGATCG CCAAGGTCGG CGAACGTTGC
GCGGAAGCCT GCCGCAAGAT CGGCTACCGC GGCGCCGGCA CCTTCGAGTT CCTCTACGAG
AACGGCGAGT TCTACTTCAT CGAGATGAAC ACGCGGGTGC AGGTGGAGCA TCCGGTGACC
GAGCTGATCA CCGGCATCGA CATCGTGCAG GCGCAGATCC GCATCGCCGC CGGCGAGAAG
CTCTGGTTCC GTCAGCGCGA CATCGAGTTC CGCGGCCACG CGATCGAGTG CCGGATCAAC
GCCGAGGATC CGTTCAAGTT CACGCCCTCG CCCGGTCGCA TAACCAACTG GCATACGCCA
GGTGGGCCGG GGATCCGGGT CGATTCGCAC GTTTACAACG GCTACACCGT GCCGCCCCAC
TACGACTCGA TGATCGGCAA GCTGATCGCA TACGGCGACA CTCGCGAGCA GGCGATCCGT
CGCATGCGCA TCGCGCTCTC CGAGATGATG GTCGAGGGCA TCAAGACCAA CATCCCGCTG
CACCAGACCC TGATGCTCGA CCCGCGCTTC AACGAGGGCT GCACCAGCAT CCATTACCTC
GAGCACAAGC TCACCCACCG CAACGAAGTG CAGGACTGA
|
|---|
| Protein sequence | MFEKILIANR GEIALRILRA CRELGIKTVA VHSEADTHAK YVRLADESVC IGPPPSAQSY
LNVPAIISAA EVTDAEAIHP GYGFLSENAD FGERVEQSGF VFIGPRPETI RLMGDKVSAK
DAMKAAGVPC VPGSDGALPE DPKEIVKIAR AVGYPVIIKA AGGGGGRGMR VVHTEAALLN
AVTTTRAEAQ AAFGNPVVYM EKFLENPRHV EIQILADQHG NAVYLGERDC SMQRRHQKVI
EEAPAPGIDR KTIAKVGERC AEACRKIGYR GAGTFEFLYE NGEFYFIEMN TRVQVEHPVT
ELITGIDIVQ AQIRIAAGEK LWFRQRDIEF RGHAIECRIN AEDPFKFTPS PGRITNWHTP
GGPGIRVDSH VYNGYTVPPH YDSMIGKLIA YGDTREQAIR RMRIALSEMM VEGIKTNIPL
HQTLMLDPRF NEGCTSIHYL EHKLTHRNEV QD
|
|---|
| |