| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3345 |
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| Symbol | rpoB |
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| ID | 7874243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3652921 |
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| End bp | 3657054 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700279 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002890317 |
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| Protein GI | 237654003 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTATT CCTACACCGA AAAGAAACGT ATCCGCAAGA GCTTCGCCAA GCGCGCGGCC
GTGCTCGATG CGCCTTTCCT GCTCGCCACC CAGATCGAGT CCTTCGCCGA ATTCCTGCAG
GCCGACACCC CGCCGGACGT CCGGCGCAAC CAGGGGCTGC AGGCCGCGTT CACCTCGATC
TTCCCGATCT CGAGCCACAG CGGCAACGCG CGGCTCGAGT ACGTCCAGTA CATGCTGGGC
GAGCCCGCCT TCGACGTGAA GGAATGCCAG CAACGCGGCC TGACCTTCGC CTCGCCGCTG
CGCGCGCGCG TGCGTCTGGT CATCATGGAT CGCGAGGCGC CGAAGGAGAC CATCAAGGAG
GTCAAGGAGC AGGAGGTCTA CATGGGCGAG ATCCCGCTCA TGACCACCAC CGGCTCCTTC
GTGATCAACG GCACCGAGCG CGTCATCGTT TCGCAGCTGC ACCGTTCGCC GGGCGTGTTC
TTCGAGCACG ACCGCGGCAA GACCCACTCC TCGGGCAAGC TGCTGTTCTC GGCGCGCATC
ATTCCCTACC GCGGCTCCTG GCTGGACTTC GAGTTCGATC CCAAGGACTA CCTGTATTTC
CGCGTCGACC GTCGGCGCAA GATGCCGGTC ACCATCCTGC TGCGCGCGAT CGGGATGACG
CCGGAGGAGA TCCTCGCGAC CTTCCACGAC ACCGACACCT TCCACCTGCA GGGCGAGGGT
GCGCAGTTCG AGCTCGTTCC CGAGCGCCTG CGCGGCGAAG TCGCGCGCTT CGACATCACC
ACGCCCGACG GCAAGATCAT CGTCGCGCGC GAGAAGCGCA TCACCTCCAA GCACATCCGC
GAGATCGACC AGGCCGGCGT GAAGACCATG GCGGTGCCGG ACGACTTCCT GCTCGGCCGG
GTGATCGCGA CCAACGTCGT CGATCCGGCC ACCGGCGAGC TGCTGGCGCG CGCCAACGAT
GAGATCACCG AGGACCTGCT CGACAAGCTG CGCCTGGCCG GCGTCACCGG CCTGAGCACG
CTGTACATCA ACGACCTCGA TCGCGGTGGC TACATCTCGC AGACGCTGCG CATCGACGAG
ACCGCCGACC AGTGGGCGGC CAAGGTTGCG ATCTACCGCA TGATGCGTCC GGGCGAGCCG
CCCACCGAGG ATGCCGTAGA GGGGCTTTTC CAGGGGCTGT TCTACGCCGA GGAGCGCTAC
GACCTGTCCT CGGTCGGCCG CATGAAGTTC AATCGCCGCG CCTACCCCGA GAAGATCGAC
GACAAGGCGC CGGGCTGGCT CAAGCGCTTC TACCAGCGCG TCGGCGCGCA GGGCGAGGAC
GGCCCGGGCG TGCTGGTCAA TGACGACATC CTCGCGGTGG TGGGCGTGCT GGTCGAGCTG
CGCAATGGCC GCGGCGAGAT CGACGACATC GACCACCTCG GCAACCGCCG CGTGCGTTCG
GTGGGCGAGC TCGCCGAGAA CCAGTTCCGT GCGGGCCTGG TGCGCGTCGA GCGCGCGGTC
AAGGAGCGCC TGTCGCAGGC CGAGTCCGAC AACCTGATGC CGCACGACCT GATCAACGCC
AAGCCGATCT CGGCGGCGAT CAAGGAGTTC TTCGGCTCCA GCCAGCTCTC GCAGTTCATG
GATCAGACCA ACCCGCTGTC CGAGATCACG CACAGGCGTC GGGTCTCGGC ACTGGGCCCG
GGCGGCCTGA CGCGTGAGCG CGCCGGCTTC GAGGTGCGCG ACGTGCACCC GACGCACTAC
GGCCGCGTGT GCCCGATCGA GACCCCGGAA GGTCCGAACA TCGGCCTGAT CAACTCGCTC
GCGGTGTATG CGCGCACCAA CCGCCACGGC TTCCTCGAGA CGCCGTACCG CAAGGTCAAT
GACGGCAAGG TCACCGACCA GATCGACTTC CTGTCGGCGA TCGAGGAGGG GCAGTATGTG
ATCGCGCAGG CGAACGCCGA GATCGACGAG GCGGGCATGC TCGCCGGCGA CCTGGTGTCG
TGCCGCCACA AGGGCGAGTT CCTGCTCGCC ACCTCGGACA TGGTGCAGTA CATGGACGTG
GCCCCGGGCC AGATCGTGTC GGTCGCGGCT TCGCTGATTC CCTTCCTGGA GCACGACGAC
GCCAACCGCG CGCTGATGGG CGCCAACATG CAGCGCCAGG CGGTGCCCTG CCTGCGCCCG
GAAAAGCCCC TGGTCGGCAC CGGCATCGAG CGCCGCGTGG CGGTCGACTC GGGCACTGCG
GTGCAGGCCA CCCGTGGCGG CATCGTGGAC TACGTGGATG CGAACCGGGT GGTGATCCGG
GTGAACGACG ACGAGACCCT GCCGGGTGAA GTCGGCGTCG ACATCTACAA CATGATCAAG
TACACCCGTT CCAACCAGAA CACCAACATC AACCAGCGCC CGGTGGTGAA GGTGGGCGAC
CTGATCGCCC GCGGCGACGT GGTGGCCGAC GGCGCTTCCA CCGACCTCGG CGAGCTCGCG
CTCGGCCAGA ACATGCTGGT CGGCTTCATG CCCTGGAACG GCTACAACTT CGAGGACTCG
ATCCTCATCT CCGAGCGCGT TGTCGCCGAC GACCGCTTCA CCTCGATCCA CATCGAGGAA
CTCACCGTCG TCGCCCGCGA CACCAAGCTC GGACCCGAGG AGATCACCCG CGACATCGCC
TCGCTCGGCG AGGCTCAGCT GTCGCGCCTG GACGAGTCGG GCATCGTGTA TATCGGTGCC
GAGGTCGAGG CCGGCGACGT GCTGGTCGGC AAGGTCACGC CCAAGGGCGA GACCCAGCTC
ACCCCCGAGG AAAAGCTGCT GCGCGCGATC TTCGGCGAGA AGGCCTCCGA CGTGAAGGAC
ACCTCGCTGC GCGTGCCCTC GGGCATGGTC GGCACCGTCA TCGACGTGCA GGTGTTCACC
CGGGAGGGCA TCGAGCGCGA CAAGCGCGCG CAGTCGATCA TCGACGAGCA GCTGCGCAGC
TTCAAGACCG ACCTCGCCGA CCAGATGCGC ATCGTCGAGC GCGACGCCTT CGCGCGTATC
CGCCGCATGA TCGTGGGCCA GCTTGCCAAC GGTGGTCCGA AGAAGCTCGC CAAGGGTGCG
GCGCTCACCG ATCCCTACCT CGACAGCCTG GAGCACTACC ACTGGTTCGA CATCCGCCTC
GCCGACGAGA CCCTCGCGGT GCAGCTCGAG GCCGTGCGGG AAGGTCTGGA GAACACCCGC
AAGGACTTCG AGCAGGCCTT CGAGATCAAG AAGAAGAAGC TCACCCAGGG CGACGAGCTC
CCCCCGGGCG TGCAGAAGAT GGTCAAGGTG TATCTGGCGG TGAAGCGCCG CCTGCAGCCG
GGCGACAAGA TGGCCGGCCG TCACGGCAAC AAGGGCGTGG TTTCCAAGAT CGTCCCGGTC
GAGGACATGC CGTACATGGA AGACGGCACC CCGCTCGACA TCGTGCTCAA CCCGCTCGGC
GTGCCGTCGC GGATGAACAT CGGCCAGATC CTCGAGACCC ACCTCGGCTG GGCAGCGAAG
GGACTCGGTC AGAAGATCGA CAAGATGCTG CAGGCGCAGG CCTCGGCGCT GGAGCTGCGC
GGCTTCCTCG AGCAGATCTA CAACGGCAGC GGCCACCCCG AGGACATCGC CAACCTCGGC
GACTCCGACG TTCGCGAGCT CGCGGGCAAC CTCAAGAAGG GCGTGCCCTT CGCGACCCCG
GTGTTCGACG GTGCCAAGGA AGAGGAAATC CAGCAGATGC TCGAGCTGGC CGGCCTGCCC
ACCGGCGGCC AGGTCACCCT CTACGACGGC CGCACCGGCG AGGCCTTCGA GCGCAAGGTC
ACCGTGGGCT ACAAGCATGT GCTGAAGCTG CACCACCTGG TCGACGACAA GATGCACGCG
CGTTCGACCG GCCCGTACTC GCTCGTCACA CAGCAACCGC TGGGCGGCAA GGCGCAGTTC
GGCGGCCAGC GCTTCGGCGA GATGGAAGTG TGGGCGCTGG AAGCCTACGG CGCCGCCTAC
ACGCTGCAGG AGATGCTGAC GGTCAAGTCC GACGACGTGA CCGGCCGGAC CAAGGTGTAC
GAAAACATCG TCAAGGGCGA GCACAAGATC GATTCCGGCA TGCCGGAATC CTTCAACGTG
CTGGTGAAGG AAATCCGTTC GCTGGCGATC GACATCGACC TCGACCGCGA GTGA
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| Protein sequence | MAYSYTEKKR IRKSFAKRAA VLDAPFLLAT QIESFAEFLQ ADTPPDVRRN QGLQAAFTSI
FPISSHSGNA RLEYVQYMLG EPAFDVKECQ QRGLTFASPL RARVRLVIMD REAPKETIKE
VKEQEVYMGE IPLMTTTGSF VINGTERVIV SQLHRSPGVF FEHDRGKTHS SGKLLFSARI
IPYRGSWLDF EFDPKDYLYF RVDRRRKMPV TILLRAIGMT PEEILATFHD TDTFHLQGEG
AQFELVPERL RGEVARFDIT TPDGKIIVAR EKRITSKHIR EIDQAGVKTM AVPDDFLLGR
VIATNVVDPA TGELLARAND EITEDLLDKL RLAGVTGLST LYINDLDRGG YISQTLRIDE
TADQWAAKVA IYRMMRPGEP PTEDAVEGLF QGLFYAEERY DLSSVGRMKF NRRAYPEKID
DKAPGWLKRF YQRVGAQGED GPGVLVNDDI LAVVGVLVEL RNGRGEIDDI DHLGNRRVRS
VGELAENQFR AGLVRVERAV KERLSQAESD NLMPHDLINA KPISAAIKEF FGSSQLSQFM
DQTNPLSEIT HRRRVSALGP GGLTRERAGF EVRDVHPTHY GRVCPIETPE GPNIGLINSL
AVYARTNRHG FLETPYRKVN DGKVTDQIDF LSAIEEGQYV IAQANAEIDE AGMLAGDLVS
CRHKGEFLLA TSDMVQYMDV APGQIVSVAA SLIPFLEHDD ANRALMGANM QRQAVPCLRP
EKPLVGTGIE RRVAVDSGTA VQATRGGIVD YVDANRVVIR VNDDETLPGE VGVDIYNMIK
YTRSNQNTNI NQRPVVKVGD LIARGDVVAD GASTDLGELA LGQNMLVGFM PWNGYNFEDS
ILISERVVAD DRFTSIHIEE LTVVARDTKL GPEEITRDIA SLGEAQLSRL DESGIVYIGA
EVEAGDVLVG KVTPKGETQL TPEEKLLRAI FGEKASDVKD TSLRVPSGMV GTVIDVQVFT
REGIERDKRA QSIIDEQLRS FKTDLADQMR IVERDAFARI RRMIVGQLAN GGPKKLAKGA
ALTDPYLDSL EHYHWFDIRL ADETLAVQLE AVREGLENTR KDFEQAFEIK KKKLTQGDEL
PPGVQKMVKV YLAVKRRLQP GDKMAGRHGN KGVVSKIVPV EDMPYMEDGT PLDIVLNPLG
VPSRMNIGQI LETHLGWAAK GLGQKIDKML QAQASALELR GFLEQIYNGS GHPEDIANLG
DSDVRELAGN LKKGVPFATP VFDGAKEEEI QQMLELAGLP TGGQVTLYDG RTGEAFERKV
TVGYKHVLKL HHLVDDKMHA RSTGPYSLVT QQPLGGKAQF GGQRFGEMEV WALEAYGAAY
TLQEMLTVKS DDVTGRTKVY ENIVKGEHKI DSGMPESFNV LVKEIRSLAI DIDLDRE
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