Gene Tmz1t_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3340 
Symbol 
ID7874238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3644099 
End bp3645289 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID643700274 
Productelongation factor Tu 
Protein accessionYP_002890312 
Protein GI237653998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00485] translation elongation factor TU
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.65971e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGG GTAAGTTCGA ACGTACCAAA CCGCACGTCA ACGTCGGCAC CATCGGCCAC 
GTCGACCATG GCAAGACCAC GCTGACCGCT GCGATCACCA CCATCCTGTC GAAGAAGTTC
GGCGGCGAGG CGAAGGCCTA CGACCAGATC GACGCGGCGC CCGAAGAGAA GGCGCGCGGC
ATCACCATCA ACACCGCGCA CGTCGAGTAC GAGACCGCGA GCCGTCACTA CGCGCACGTC
GATTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCCGC GCAAATGGAC
GGCGCGATCC TGGTGTGCTC GGCCGCCGAC GGCCCGATGC CGCAGACGCG CGAGCACATC
CTGCTGGCCC GTCAGGTCGG CGTGCCGTAC ATCATCGTCT TCCTGAACAA GTGCGACATG
GTCGACGACG AGGAGCTGCT GGAGCTCGTC GAGATGGAAG TGCGCGAGCT GCTGTCGAAG
TACGACTTCC CCGGCGACGA CATCCCCATC GTCAAGGGTT CGGCGCTGAA GGCGCTCGAG
GGCGACCAGT CGGACATCGG CGAGCCGGCG ATCTTCCGCC TGGCTGACGC GCTGGACAGC
TACATCCCGA CGCCCGAGCG TGCGATCGAC AAGCCTTTCC TGCTGCCGAT CGAAGACGTG
TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGTCGTG TCGAGCGCGG CATCGTGAAG
GTCGGCGAGG AAATCGAGAT CGTCGGCATC AAGCCGACGG TCAAGACCAC CTGCACCGGC
GTGGAGATGT TCCGCAAGCT GCTCGACCAG GGCCAGGCCG GCGACAACGT CGGCGTGCTG
CTGCGCGGCA CCAAGCGTGA AGACGTCGAG CGTGGTCAGG TGCTGTGCAA GCCGGGTTCG
ATCACCCCGC ACACCCACTT CACCGGCGAG ATCTACGTGC TGTCGAAGGA AGAGGGCGGT
CGTCACACCC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGCAC CACCGACGTG
ACCGGTTCGA TCTCGCTGCC CGAAGGCACC GAGATGGTCA TGCCGGGCGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GTCTGCGCTT CGCGATCCGC
GAAGGTGGCC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
 
Protein sequence
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AITTILSKKF GGEAKAYDQI DAAPEEKARG 
ITINTAHVEY ETASRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLSK YDFPGDDIPI VKGSALKALE
GDQSDIGEPA IFRLADALDS YIPTPERAID KPFLLPIEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGTKREDVE RGQVLCKPGS
ITPHTHFTGE IYVLSKEEGG RHTPFFNNYR PQFYFRTTDV TGSISLPEGT EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE