| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3339 |
|---|
| Symbol | rpsJ |
|---|
| ID | 7874237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3643700 |
|---|
| End bp | 3644011 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643700273 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_002890311 |
|---|
| Protein GI | 237653997 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000104246 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACC AGAAGATCCG CATCCGCCTG AAAGCCTTCG ACTATCGCCT GATCGATCAG
TCGGCCCTCG AGATCGTCGA TACCGCCAAG CGCACCGGCG CCGTGGTCCG TGGTCCCGTG
CCGCTGCCGA CCCGCATCGA GCGTTTCGAC CTGTTGCGTT CGCCGCACGT CAACAAGGCG
TCGCGCGACC AGATGGAGAT CCGCACTCAC CAGCGTCTGA TGGACATCAT CGATCCGACC
GACAAGACGG TCGACGCGCT GATGAAGCTG GATCTGCCCG CTGGCGTGGA TGTCGAGATC
AAGCTCCAGT AA
|
|---|
| Protein sequence | MQNQKIRIRL KAFDYRLIDQ SALEIVDTAK RTGAVVRGPV PLPTRIERFD LLRSPHVNKA
SRDQMEIRTH QRLMDIIDPT DKTVDALMKL DLPAGVDVEI KLQ
|
|---|
| |