Gene Tmz1t_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3335 
SymbolrplB 
ID7874233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3641182 
End bp3642009 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID643700269 
Product50S ribosomal protein L2 
Protein accessionYP_002890307 
Protein GI237653993 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.45842e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCG TTAAACTGAA GCCTACGTCT GCCGGCCGCC GTGCCCAAGT CAAGGTGGTC 
AACCCCGATC TGTACAAGGG TCGTCCGGTC GATGCGCTGA TCGAGAAGCA GACCAAGAAC
GCCGGCCGTA ACAACTACGG TCGCGTGACG ATGCGCCACC AGGGTGGCGG CCATAAGCAG
CACTACCGCC TGGTGGATTT CCGTCGCAAC AAGGACGGCA TTCCGGCCAA GGTCGAGCGC
ATCGAGTACG ACCCGAACCG CTCCGCGCAC ATCGCGCTGC TGTGCTATGC CGATGGCGAG
CGCCGCTACA TCATCGCGCC GCGCGGCGTA GAGGTCGGCC AGCAACTGAT CAGTGGCGCG
GAAGCGCCGA TCAAGGCGGG CAACGCCCTG CCGATCCGCA ACATCCCGGT CGGCTCGACG
ATCCACTGCA TCGAGATGGT TCCCGGCAAG GGTGCGCAAC TCGCGCGCGC CGCCGGCACT
TCGGTGCAGC TGCTCGCCCG CGAAGGCTCG TACGCCCAGC TCCGCCTGCG CTCCGGCGAG
ATCCGCCGTG TGCACGTCGA GTGCCGCGCC ACCATCGGTG AAGTCGGTAA CGGCGAGCAT
GGCCTGCGCA AGATCGGCAA GGCTGGCGCG AACCGCTGGC GCGGTATCCG TCCGACCGTT
CGCGGTGTGG CGATGAACCC GGTGGATCAC CCGCATGGTG GTGGCGAAGG CCGCACCGGC
GAGGCGCGCG AACCGGTCAG TCCGTGGGGC ACGCCGGCCA AGGGCTATCG GACGCGTTCG
AACAAGCGCA CCGACGGCAT GATCGTGCAG CGTCGTCACA AGCGTTAA
 
Protein sequence
MAIVKLKPTS AGRRAQVKVV NPDLYKGRPV DALIEKQTKN AGRNNYGRVT MRHQGGGHKQ 
HYRLVDFRRN KDGIPAKVER IEYDPNRSAH IALLCYADGE RRYIIAPRGV EVGQQLISGA
EAPIKAGNAL PIRNIPVGST IHCIEMVPGK GAQLARAAGT SVQLLAREGS YAQLRLRSGE
IRRVHVECRA TIGEVGNGEH GLRKIGKAGA NRWRGIRPTV RGVAMNPVDH PHGGGEGRTG
EAREPVSPWG TPAKGYRTRS NKRTDGMIVQ RRHKR