Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3323 |
Symbol | rplF |
ID | 7874221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3636229 |
End bp | 3636762 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643700257 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_002890295 |
Protein GI | 237653981 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00060748 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTG TAGCCAAGAA TCCGGTGGCG ATCCCGCAGG GCGTGGAAGT GATGATTTCC GACGCCGAGA TCGCAGTGAA GGGGCCTCTG GGTACCCTGC GCCAGCCGCT GAGCGGCGAG GTCAGCGTGG TCCGCGAAGG TGACGCGGTG GTGTGCAAGG CGCGTGAGGG CGCCGAGAAC GCCCGTGCCA TGTCCGGCAC CGTGCGCGCT CTGGTGAATA ACATGGTGAC GGGCGTGACC AAGGGCTTCG AGCGCAAGCT CACCCTGGTC GGCGTGGGTT ATCGCGCGCA GGCTCAGGGC GACAAGCTCA ACCTGTCGCT CGGTTTCTCT CACCCGGTGG TTCACCAGAT GCCGGAAGGC GTGAAGGTCG AGACGCCGAC CCAGACCGAG ATCGTGATCA GGGGTTCCGA CAAGCAGAAG GTCGGCCAGG TCGCTGCCGA GGTGCGTGCC TACCGCGCTC CCGAGCCCTA TAAGGGCAAG GGCGTCCGTT ACTCGGACGA GGTGGTGGTG CTCAAGGAAA CCAAGAAGAA GTAA
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Protein sequence | MSRVAKNPVA IPQGVEVMIS DAEIAVKGPL GTLRQPLSGE VSVVREGDAV VCKAREGAEN ARAMSGTVRA LVNNMVTGVT KGFERKLTLV GVGYRAQAQG DKLNLSLGFS HPVVHQMPEG VKVETPTQTE IVIRGSDKQK VGQVAAEVRA YRAPEPYKGK GVRYSDEVVV LKETKKK
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