| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3313 |
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| Symbol | rpsD |
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| ID | 7874211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3631537 |
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| End bp | 3632166 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700247 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_002890285 |
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| Protein GI | 237653971 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTCGTA ATCTCGATCC CAAGTGCCGT CAGTGCCGTC GCGAAGGCGA AAAGCTGTTT
CTGAAGGGCG AAAAGTGCTT TACCGACAAG TGCTCCATCG AGCGTCGCGC CTACGCGCCC
GGCCAGCATG GCCAGCGCTC CGGCCAGCGC CTGTCGGGCT ACGGCGTCCA GCTGCGTGAG
AAGCAGAAGA TCCGCCGCAT CTACGGCGTG CTCGAGCGCC AGTTCCGCAA GGTGTATGCC
GAAGCCGACC GCCGCCGCGG CCAGACCGGC GAGAATCTTC TGCAGCTGCT CGAAGGTCGC
CTGGATGCCG TCGCGTATCG CATGGGCTTC GGTGCCTCGC GTGCAGAGGC GCGCCAGGTG
GTGCGTCACA ACGGCGTGCT GGTCAATGGC AAGCGCGTCA ACATTCCGTC GTATGTGGTT
CGTCCGGGCG ACGTGGTGGA GCTGACCGAG CGTGCGCGTG GTCATCTGCG CGTCAAGGCC
GCCCTCGAGG CCGCCGAGTC GCGTGGCTTC CCCGAGTGGC TCGAGGTGGA CGCGAAGGCC
GGCAAGGGCA CGTTCAAGGC CTATCCGGTG CGCAGCGAAC TGCCCCCGAC GATCAACGAA
GGCCTGGTCG TGGAACTGTA CTCCCGCTGA
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| Protein sequence | MARNLDPKCR QCRREGEKLF LKGEKCFTDK CSIERRAYAP GQHGQRSGQR LSGYGVQLRE
KQKIRRIYGV LERQFRKVYA EADRRRGQTG ENLLQLLEGR LDAVAYRMGF GASRAEARQV
VRHNGVLVNG KRVNIPSYVV RPGDVVELTE RARGHLRVKA ALEAAESRGF PEWLEVDAKA
GKGTFKAYPV RSELPPTINE GLVVELYSR
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