Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3230 |
Symbol | |
ID | 7874451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3531654 |
End bp | 3533582 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643700164 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_002890202 |
Protein GI | 237653888 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.7142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC CGATCGACAT GAAGCGATAT GCGCAGCTCA AGGCGGCGGG AGACCTGCCT TCGCCGCGCG GCGTGGCGCT CGCGATCATC CGGCTCACGC AGGCGCCCGA CGTCTCGCTG GCCGAGCTCG GCCGCGTGAT CAAGGGCGAT CCCGCCTTCG TCGGGCGCCT GATCAAGGCG GCCAATGGCC TCATCGCGGA GAACCGGCGC GCGATCGTGT CGGTGCAGGA AGCGCTGATG GTGCTCGGCC TGCCCGCCGT GCGCACGCTG GCGCTGGGCT TCTCGCTGCT GTCGACCTAC CGCAAGGGTA CCTGCCAGGG CTTCGACTAC CCGCGTTTCT GGTCCTCCGC GCTGCTGATG GCGATCTCGA TGCAGGCGCT CACCCAGCGC GTGCGGGTGG TCGCACCCGA CGAGGCGTTC AGCCTCGGCC TGCTCGCGCG CGTGGGCGAG CTCTCGCTCG CGACCCTCTA TCCCGAGGCC TTCTCCCGCC TGCTCGCGGA ACTCAAGCGC GATCCCGCCC TGCAGCAGGT GGTGCTCGAG GACCAGGCCT TCGCGATGAA CCACCGCGAG CTCGGTGCCG CCATGCTTGC CGACTGGGGG GTGCCGGACG CGCTGGTGCA ACCGGTGCGC TTCCACGAAC AGCCCGAGCT GGCCGGCTAC GCGGAGGATT CGCGCGAGGC CGGGATCGTG CAGTGCCTCG TGCTGGCGCG CGCGGTGGCG CAGCTGTGCC TCGCGCCCGA TTCCGAACAC GTGCGTCTGA TGGCGCCGAT GCTGCGCCTG GCGGGCCGCC TCGGCCTCGG GCGCGGCGAG TTCGTCTCGC TGTGCGAGCG CGTCGGGCGC GACTGGGCGG AGTGGGGCAA GCTGCTGCAG ATCCGCACCG AGGACGCGCC CCGCTTCGCC GAGGTGGGCA GCGCGGCGGT GGATGCGGTT GGCGAGGCGC CCAAGGTGGC CGCCGAGGCC GCTGGTCCGC AGCCGATGCG TGCGTTGGTC GTGGCCGGCG CGCGCGAGGA CCGCGAGCTG CTGCGCGGCG AGCTCGAAGC CGCGGGGATC GTCCCGTTCA CCGCTGCGGG CGCGGACGCC GCGCTCGAGG CCGCGCTCGA CGTCCAGCCG CAACTGCTGG TCGCGGACTG GTCGGAGGAG GGGGAACGGG TGGTGCGCGG CCTGCGCGAC ATGCGCCTCG GACGCGGCGT GTACGTGATC TGCATGCTCG GCAGCGACGA CGAGGCGCGC CTGCTGGCCG CCTCCGGCGC CGGGGTTGAC GACTTCCTCG TCCGTCCGCT GCGACGTGCG GCGCTGACCG TGCGCCTGCG TGCCTGCGTG CGCACATTGG TGTTGCAGCA GGAACTCGAG CACGAGCGCG AGGAACTGCG CAATTTCGCC GCCGAGCTGT CGATCTCGAA CCGCCGCCTG CAGGAGGCCG CGCTGACCGA CCCGCTCACC GGTCTGCCCA ACCGCCGTCG GGCGATCGAG GCGATGGAGG CCGAGTGGGC CACGGCGACG CGTCACGGTC GCGCCTTCTC GGTCATGATC GTCGACCTCG ACGGCTTCAA GACCATCAAC GACACCCATG GGCACGACGT CGGCGACATG GCCCTGCGCC AGGCCGCGGC GACCCTGCGT GGCGCGCTGC GCGCCCAGGA CCTGATCTGC CGTACCGGTG GCGACGAGTT CCTGGTGCTA TGCCCCGATA CCGACCTGAA GGCGGCGATG CTGGTCGCGG AGCGCCTGCG CGTGGCCGTG CAGGCCAGTC CGGTCGAGAC CGGCGGCCCG CAGATCTTCC TCACTGCCAG CGTCGGCGTG GCCATGCGCG TGCCCGCCAT GGGCAGCGTC GATGCACTGA TCAAGTGTGC CGACGACAGC GTGTATCGTG CCAAGCAGCG TGGCCGCAAC TGCATCGCCG CACTCCAGCT CCAGTCCGGC GCGGGCTGA
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Protein sequence | MPQPIDMKRY AQLKAAGDLP SPRGVALAII RLTQAPDVSL AELGRVIKGD PAFVGRLIKA ANGLIAENRR AIVSVQEALM VLGLPAVRTL ALGFSLLSTY RKGTCQGFDY PRFWSSALLM AISMQALTQR VRVVAPDEAF SLGLLARVGE LSLATLYPEA FSRLLAELKR DPALQQVVLE DQAFAMNHRE LGAAMLADWG VPDALVQPVR FHEQPELAGY AEDSREAGIV QCLVLARAVA QLCLAPDSEH VRLMAPMLRL AGRLGLGRGE FVSLCERVGR DWAEWGKLLQ IRTEDAPRFA EVGSAAVDAV GEAPKVAAEA AGPQPMRALV VAGAREDREL LRGELEAAGI VPFTAAGADA ALEAALDVQP QLLVADWSEE GERVVRGLRD MRLGRGVYVI CMLGSDDEAR LLAASGAGVD DFLVRPLRRA ALTVRLRACV RTLVLQQELE HEREELRNFA AELSISNRRL QEAALTDPLT GLPNRRRAIE AMEAEWATAT RHGRAFSVMI VDLDGFKTIN DTHGHDVGDM ALRQAAATLR GALRAQDLIC RTGGDEFLVL CPDTDLKAAM LVAERLRVAV QASPVETGGP QIFLTASVGV AMRVPAMGSV DALIKCADDS VYRAKQRGRN CIAALQLQSG AG
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