Gene Tmz1t_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3216 
Symbol 
ID7874437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3517581 
End bp3518006 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID643700150 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002890188 
Protein GI237653874 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.300081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCC GTCGCGGCAG CCGCAACGGC GAGCCCGAGA TCAACCTGAT CCCGCTCATC 
GACGTGGTGT TGGTGATCAT CATCTTCCTG ATGCTGACCA CCACGTTCTC CAAGGTCTCC
GGGCTGGAGA TCAAGCTGCC CACCGCCGAG GCCGAGGGCA GCGAGACCGA GGCGCGCGAG
ATCGTGGTCG CGGTGACCGC CGCCGGCGAG GTCCTGGTGA ATCGCCAGGC AGTGGGTGAG
CGCAGCGTCG AGGCGATCGC CGCCGCGCTC GGCAAGTCGG CCCCGGCCGA CGGCGACACG
CCGCCGGTGG TGGTGATCAA CGCCGACGCG CGCACCCCGC ACCAGAGCGT GGTGGACGTG
ATGCAGGCCG CGCAGCGCGC GGGGCTGCCG CACATCACCT TCGCCACCCA GTCGTCGGCG
CAGTGA
 
Protein sequence
MNFRRGSRNG EPEINLIPLI DVVLVIIIFL MLTTTFSKVS GLEIKLPTAE AEGSETEARE 
IVVAVTAAGE VLVNRQAVGE RSVEAIAAAL GKSAPADGDT PPVVVINADA RTPHQSVVDV
MQAAQRAGLP HITFATQSSA Q