| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3197 |
|---|
| Symbol | |
|---|
| ID | 7874337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3482910 |
|---|
| End bp | 3484727 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643700126 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_002890169 |
|---|
| Protein GI | 237653855 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA TGATTGAAGT GAAGGTGCCC GACATCGGCG ATTTCGATGC GGTGCCGGTG
ATCGAGCTGT TCGTGAAGGT CGGCGACAGC ATCGCGGTGG ACGATGCGAT CTGCACGCTG
GAATCCGACA AGGCCACGAT GGACGTGCCG TCCTCCGCCG CGGGCGTGGT CAGGGAAGTG
CTGGTCAACC TGGGCGACAA GGTCGGCGAG GGCGCGGTGC TGATCCGGCT CGAAGCCGCC
AGTGCCGCTG CAGGAGCGGC GCAAGCCGCG AACACGGCGC CTGCCTCCCC GCCGGCCTCC
GCACCTGCAC CCTCCGCGGC TTCCGCCGCT CCTGCGGCCA CGCCGAGCGC CGCCCCGGCG
GCGGCGAGCC ACGCCGGCGG CGCCGACGCC GAATACGACA TGATCGTGCT CGGCGCCGGC
CCGGGCGGCT ACTCGGCGGC CTTCCGCGCC GCCGACCTCG GCCTCAAGAC CGCGATCATC
GAGCGCTATT CGACGCTCGG CGGCGTGTGC CTGAACGTGG GCTGCATCCC GTCCAAGGCG
CTGCTGCACG TGGCAGCGGT GATCGAGGAG GCAGAGCATG TCGACAAGGC GGGTATCGTC
TTCGCCAAGC CGAGCGTGGA CGTCGATGCG CTCAGAAAGC ACAAGGACGG CGTGATCGGC
AAGCTCACCG GGGGGCTCTC CGGCATGGCC AAGGCGCGCA AGGTCGACAT CCTGCGCGGC
TACGGCAGCT TCCTCGACCC CAACCACCTC GAGATCGAGG AGACCACTGG CGCGAGCCAG
GACAAGACCG GCACGAAGAA GGTGGTGAAG TTCAGGAACT GCATCATCGC CGCCGGCTCG
GCCGCGGTGC ACCTGCCCTT CCTGCCGCGC GACCCGCGCA TCGTCGACTC CACCGGCGCG
CTCGAGCTGC GCCAGGTGCC GGGCAAGATG CTCGTGATCG GCGGCGGCAT CATCGGCCTG
GAGATGGCCA CGGTGTACTC CACGCTGGGT GCCCGCATCG ACGTGGTCGA GATGCTCGAC
CGCCTGATGC AGGGCCCGGA CGCCGACGCC GTCAAGGTAT GGGAGAAGCA GAACGCCCAC
CGCTTCGACA ACATCATGCT CAAGACCAAG ACCGTCGCCG TCGAAGCGAA GGAAGACGGA
CTGTGGGTGA AGTTCGAGGG CGAGAAAGCC CCCGCCGAGC CGGTGCGCTA CGACATGATC
CTGCAATCGG CAGGCCGTTC GCCCAACGGC AACAAGATCG GCGCCGAGAA GGCGGGCGTG
ATCGTCGGCG AGCGCGGCTT CATCCCGGTG GATGCGCAGA TGCGCACCAA TGTGCCGCAC
ATCTTCGCGA TCGGCGACAT CGTCGGCCAG CCCATGCTCG CCCACAAGGC AGTGCATGAG
GGGCACGTCG CCGCGGAAGT GGCAGCCGGC CATAAGGCGG CCTTCGACGC CACCGTGATC
CCGGGCGTGG CCTACACCCA TCCGGAAGTG GCCTGGGTCG GCTACACCGA GGCGCAGGCC
AAGGCCGAGG GCAAGAAGGT CGATACCGCC AAGTTCCCGT GGGCGGCCAG CGGGCGCGCC
ATCGCCAACG GCGCCGACTA CGGCTTCACC AAGCTGATCT TCGACGCCGA GACTCACCGC
GTGATCGGCG GCACCATCGT CGGGCCGTCG GCCGGCGACA TGATCGGCGA GGTGTGCCTG
GCCATCGAGA TGGGGGCCGA CGCCACCGAC ATCGGCAAGA CCATCCACCC GCATCCGACC
CTGGGTGAGA CGGTGGGCAT GGCCGCCGAA GTGGCCCACG GCAGCTGCAC CGACCTGCCA
CCGATGCGCA AGAAGTAA
|
|---|
| Protein sequence | MSQMIEVKVP DIGDFDAVPV IELFVKVGDS IAVDDAICTL ESDKATMDVP SSAAGVVREV
LVNLGDKVGE GAVLIRLEAA SAAAGAAQAA NTAPASPPAS APAPSAASAA PAATPSAAPA
AASHAGGADA EYDMIVLGAG PGGYSAAFRA ADLGLKTAII ERYSTLGGVC LNVGCIPSKA
LLHVAAVIEE AEHVDKAGIV FAKPSVDVDA LRKHKDGVIG KLTGGLSGMA KARKVDILRG
YGSFLDPNHL EIEETTGASQ DKTGTKKVVK FRNCIIAAGS AAVHLPFLPR DPRIVDSTGA
LELRQVPGKM LVIGGGIIGL EMATVYSTLG ARIDVVEMLD RLMQGPDADA VKVWEKQNAH
RFDNIMLKTK TVAVEAKEDG LWVKFEGEKA PAEPVRYDMI LQSAGRSPNG NKIGAEKAGV
IVGERGFIPV DAQMRTNVPH IFAIGDIVGQ PMLAHKAVHE GHVAAEVAAG HKAAFDATVI
PGVAYTHPEV AWVGYTEAQA KAEGKKVDTA KFPWAASGRA IANGADYGFT KLIFDAETHR
VIGGTIVGPS AGDMIGEVCL AIEMGADATD IGKTIHPHPT LGETVGMAAE VAHGSCTDLP
PMRKK
|
|---|
| |