Gene Tmz1t_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3187 
Symbol 
ID7874327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3467793 
End bp3468905 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content76% 
IMG OID643700116 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_002890159 
Protein GI237653845 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.436725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCC CCGGGGCCGG ACGGCGCGGC CGCATCGAAT CCTCCACGCC CGCCGCGATC 
GCCGAGGCTG CTGCCCTGCT GCGTGCGGGC GAACTCGTCG GCATGCCGAC CGAGACGGTC
TACGGGCTGG CCGCCGACGC GCTCGACCCC GAGGCGGTGA AGAAAATCTT CGCCGCCAAG
GGCCGTCCCG CCGACCACCC GCTGATCGTG CACCTGCCCT CGGTCGAGCA CCTGCCGCAG
TGGGCCGCCG CCATCCCCAA GGACGCGCTC GCGCTCGCGC GCGCCTTCTG GCCCGGCCCG
CTGACGCTGA TCCTGAAGCG CACACCCGAC GTACCCGACG AAGTCACCGG CGGGCAGGAC
ACGGTCGGCG TGCGCGTGCC CGCGCACCCG GTCGCGCTCG CCCTGCTGCG GGCCTTCGAC
GGCGGGCTGG CCGCGCCCAG CGCCAACCGC TTCGGCCGTA TCAGCCCCAC CACCGCCGCG
CATGTGCATG AAGAACTCGG CGAGCGCGTG GCGATGATCC TCGACGGCGG TGCCTGCGCG
GTCGGCATCG AATCCACCAT CCTCGACTTC TCGCGCGACG TGCCGGAGAT CCTGCGCCCG
GGCGCGATCA CGCCCGAGGA CATCGCGCGC GTCATCGGCC GCCGGCCGCG GGTGCCGGGC
GAGTCGGTCG CGGAAACCGC TTCCGCGCGG GCAGGGCAGT GCGGCGACGC GTCCGGACTC
GCGGAAGCCG CCGCCCCCAA CGCCGCAGCC GATGCAGCGC AGCCCGCTCC GCGCGTCTCC
GGCGCACTCG CCGCCCATTA CGCCCCGCGC ACCCCGCTGC GCCTGGTCGA GCCCGCGCTG
CTCGCCGACG AGGCCGCCGC GCTGGCGGGC GAGGGCAGCC GCGTCGCAGT GCTCGCCCAC
TCAACCTCCG ATCCGCGTGA CGCCCGCCTG AGCTGGCGCA GCCTGCCGGC CGATCCCGCC
GCCTACGCCC AGGGCCTGTA CGCCAGCCTG CGCGCCCTCG ACGGCGTCGG CGCCGACTTA
ATCCTGATCG AAGCGCTCCC CGGCGGCCCC GGCTGGCGCG CCGTCGCCGA CCGCCTCGGC
CGCGCCGCCG TCGGCTCCGG CGCAACTGAC TAG
 
Protein sequence
MSTPGAGRRG RIESSTPAAI AEAAALLRAG ELVGMPTETV YGLAADALDP EAVKKIFAAK 
GRPADHPLIV HLPSVEHLPQ WAAAIPKDAL ALARAFWPGP LTLILKRTPD VPDEVTGGQD
TVGVRVPAHP VALALLRAFD GGLAAPSANR FGRISPTTAA HVHEELGERV AMILDGGACA
VGIESTILDF SRDVPEILRP GAITPEDIAR VIGRRPRVPG ESVAETASAR AGQCGDASGL
AEAAAPNAAA DAAQPAPRVS GALAAHYAPR TPLRLVEPAL LADEAAALAG EGSRVAVLAH
STSDPRDARL SWRSLPADPA AYAQGLYASL RALDGVGADL ILIEALPGGP GWRAVADRLG
RAAVGSGATD