| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3089 |
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| Symbol | |
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| ID | 7874559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3342880 |
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| End bp | 3344052 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700012 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002890064 |
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| Protein GI | 237653750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCA CGTTCAAACT CGCCGGCAAC CTCGCCCTGA CCCTCGCGCT GGCCGCTGCC
GGCATCGGCG CCGCGAACGC GGCCGACAAG GTCAAGGTCG GCCTGATGCT GCCCTACACC
GGCACCTACG CCGCGCTCGG CACCGCGATC ACCAACGGCT TCAAGCAGTT CGTCGACGAG
AACGGCGGCA AGCTCGGCGG CCGCGAGGTC GAATACTTCA CCGTCGACGA CGAGTCCAAC
CCGGCCAAGG CGACCGAGAA CGCCAAGAAG CTGGTCTCGC GCGACAAGGT CGACGTGCTG
GTCGGTACCG TCCACTCCGG GGTCGCGCTC GCCATGGCCA AGGTGGCCCG CGACACCAAG
ACCCTGATGA TCGTCCCCAA CGCCGGCGCC AACGAGCTGA CCGGCCCGCT GTGCTCGCCC
TACATCTTCC GCTCGTCCTT CTCGGCCTGG CAGCCGTCCT ACGCGATGGG CGAGGCGCTT
GCGAAGAAGG GCATCAAGAA CGTCGCCACG GTGACCTGGA AGTACTCCTT CGGCGAGGAG
TCGGTCGCCG GCTTCAAGGA AGCCTTCGAG AAGGGGGGCG GCAAGCTCGT CAAGGAAATG
ACCTTGCCGT TCCCCAACGT CGAGTTCCAG CCCTTCCTGA CCGAGATTGC CGCGGCCAAG
CCCGATGCGG TGTTCGTCTT CTTCGCCGGC GCCGGCGCCG CCAAGTTCGT CGCCGATTAT
GCCGCGGCCG GTCTCAAGAA CAGCATCCCG CTGTACGGCC CGGGCTTCCT CACCGACGGC
AACCTCGGTG CGATGGGCGG AGCGGGCGAG GGCCTGCTCA CCACGCTGCA CTACGCCGAC
GGCCTGACCC ACGCCAGGGA TGCGGCCTTC CGCACCAAGT ACGCGACGAC CTACAAGCTC
CAGCCCGACG TCTATGCGGT GCAGGGCTAC GACGCCGCGC AGATGTACGA GGCCGGCCTG
AAGGCCGCCG GCGGCGATCC GGAGAAGCAG GAAGAGATCA TCAAGGGCAT GGAGTCCGCC
AAGATCGACA GCCCGCGTGG CGCCTTCACG CTGTCCAAGG CGCACAACCC GGTGCAGGAC
ATCTACATGC GCCAGGTCAA GGGTGATCAG AACGTGATGC TCGAGATCGT CTCCAAGGGC
CTCGAGGATC CCGCCCGCGG CTGCAAGATG TAA
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| Protein sequence | MKSTFKLAGN LALTLALAAA GIGAANAADK VKVGLMLPYT GTYAALGTAI TNGFKQFVDE
NGGKLGGREV EYFTVDDESN PAKATENAKK LVSRDKVDVL VGTVHSGVAL AMAKVARDTK
TLMIVPNAGA NELTGPLCSP YIFRSSFSAW QPSYAMGEAL AKKGIKNVAT VTWKYSFGEE
SVAGFKEAFE KGGGKLVKEM TLPFPNVEFQ PFLTEIAAAK PDAVFVFFAG AGAAKFVADY
AAAGLKNSIP LYGPGFLTDG NLGAMGGAGE GLLTTLHYAD GLTHARDAAF RTKYATTYKL
QPDVYAVQGY DAAQMYEAGL KAAGGDPEKQ EEIIKGMESA KIDSPRGAFT LSKAHNPVQD
IYMRQVKGDQ NVMLEIVSKG LEDPARGCKM
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