| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3056 |
|---|
| Symbol | |
|---|
| ID | 7874526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3309284 |
|---|
| End bp | 3310819 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643699979 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_002890031 |
|---|
| Protein GI | 237653717 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TTCTCGGTGT CGTCGCCACC TCCCCGGTCA ACCAACTGCT CTATGACGGC
CTCCAGGTGT TGCAGCACCG CGGCCAGGAC GCGGCGGGCA TCGCCACCTC GGAGGGCGGG
CGTTTCCACA TGCACAAGGG CTCCGGCCTC GTGCGCGACG TGTTCCGCAC GCGCAACATG
CGCAATCTCC AGGGCAACTG GGGTATCGGC CATGTGCGCT ACCCGACCGC GGGCTCGGCC
TACAACGCCG CCGAGGCGCA GCCCTTCTAC GTCAACTCGC CCTTCGGCCT GTTGCTGGCG
CACAACGGCA ACCTGACCAA CTCGGAAGCG CTCAAGCGCG AGATGTTCCT GTCCGACCTG
CGCCACATCA ACACCAGCAG CGACTCCGAG GTGCTGCTCA ACGTCTTCGC ACACGAGCTG
CAGGCTGCCT GCAAGGGGCT CAAGATCGAC GAGGAGGCCA TCTTCACCGC GGTCGCCGGC
GTGCATCGGC GCTGCCGCGG CGCCTACGCG GTGGTGGTGA TGATCGCCGG CTACGGTCTG
CTCGCCTTCC GCGACCCTTA CGGCATCCGC CCCCTGGTGA TCGGCCGCAA CGACTGCGAG
GCCGGCACCG AGTGGCTGGT GGCCTCGGAG TCGGTGGCGG TGGACGTGCT CGGCTTCCGC
CTGCTGCGCG ACGTCGCGCC GGGCGAGGCG GTGCTGGTCG ATACCGCCGG CCGCTTCCAC
AGCCGCCAGT GCGCCGCGCG CACGGTGCAT GCGCCGTGCA TGTTCGAGTT CGTCTACCTG
GCACGGCCGG ATTCGATCAT CGATGGCGTG TCGGTGTACG AGTCGCGCAT GAAGATGGGC
GAGTTCCTCG CCGACAAGAT GCGCCGCACC ATGCCCAACG TGCACATCGA CGTGGTGATC
CCGATCCCCG ACTCCAGCCG CCCCTCGGCG ATGCAGATGG CCGACCGGCT CGACCTGCCC
TTCCGCGAGG GCTTCGTCAA GAACCGCTAC ATCGGCCGCA CCTTCATCAT GCCCGGCCAG
GCCACGCGCC GGAAGTCGGT ACGCCAGAAG CTCAACACCA TCCATCAGGA GTTCAAGGGC
AAGAGCGTGC TGCTGGTCGA CGACTCCATC GTGCGCGGCA CGACCAGCAA GGAGATCGTC
AACATGGCGC GCGAGGCGGG GGCCACCAAG GTCTATCTCG CCTCGGCCGC GCCGCCGGTG
CGCTACGCCA ACGTCTACGG CATCGACATG CCCACGCGCG GCGAGCTGAT CGCCTCCGAC
CGCAGTGAAG AGGAGATCTG CCGCGAGATC GGCGCCGACG GCCTCATCTA CCAGGACCTC
GACGACCTCA AGGCCTCGGT GCGTGCGCTC AATCCCTCGC TGCAGTTCTT CGAGACCTCG
TGTTTCGACG GCCACTACAT CACCGGCGAC ATCACCGTCG AGTACCTCAA CGGCGTCGAG
AACCAGCGCA GTGAAGCCAA GCCGGGCAAG AACGACCAGG ATGACGGGGA CGATGGCCAG
CTCGACCTGA ACCTCGCCTC CGACGCCGAG CACTGA
|
|---|
| Protein sequence | MCGILGVVAT SPVNQLLYDG LQVLQHRGQD AAGIATSEGG RFHMHKGSGL VRDVFRTRNM
RNLQGNWGIG HVRYPTAGSA YNAAEAQPFY VNSPFGLLLA HNGNLTNSEA LKREMFLSDL
RHINTSSDSE VLLNVFAHEL QAACKGLKID EEAIFTAVAG VHRRCRGAYA VVVMIAGYGL
LAFRDPYGIR PLVIGRNDCE AGTEWLVASE SVAVDVLGFR LLRDVAPGEA VLVDTAGRFH
SRQCAARTVH APCMFEFVYL ARPDSIIDGV SVYESRMKMG EFLADKMRRT MPNVHIDVVI
PIPDSSRPSA MQMADRLDLP FREGFVKNRY IGRTFIMPGQ ATRRKSVRQK LNTIHQEFKG
KSVLLVDDSI VRGTTSKEIV NMAREAGATK VYLASAAPPV RYANVYGIDM PTRGELIASD
RSEEEICREI GADGLIYQDL DDLKASVRAL NPSLQFFETS CFDGHYITGD ITVEYLNGVE
NQRSEAKPGK NDQDDGDDGQ LDLNLASDAE H
|
|---|
| |