| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3034 |
|---|
| Symbol | ihfB |
|---|
| ID | 7874504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3283893 |
|---|
| End bp | 3284180 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643699957 |
|---|
| Product | integration host factor subunit beta |
|---|
| Protein accession | YP_002890009 |
|---|
| Protein GI | 237653695 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0949718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAT CGGAGCTGAT CGCCCAGCTG GCGGAGCGTT TTCCCCAGCT GGTCGCAAAG
GACGCCGATT ACGCGGTCAA GATGATTCTC GATGCGATGA CCGACGCGCT CGCGCGCGGT
GATCGCATCG AGATCCGCGG GTTTGGCAGC TTTGCGCTGA ACTACCGTCC GCCCCGTACC
GGGCGCAATC CCAAGTCCGG CGAGAAGGTG CTGGTGCCGG AAAAATACGT CCCGCATTTC
AAGGCGGGCA AGGAATTGCG CGAAAGGGTG GATCTCGGCG GAAGTTGA
|
|---|
| Protein sequence | MTKSELIAQL AERFPQLVAK DADYAVKMIL DAMTDALARG DRIEIRGFGS FALNYRPPRT
GRNPKSGEKV LVPEKYVPHF KAGKELRERV DLGGS
|
|---|
| |