Gene Tmz1t_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3006 
Symbol 
ID7874395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3257045 
End bp3258190 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID643699927 
Productputative lipoprotein 
Protein accessionYP_002889981 
Protein GI237653667 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.169613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCT CCAAGCGCAC CTCCCTGTCC CTGCTCGCGC TCTCGATCGC GCTCGGCGGT 
TGTTCAGGAT CGCTGCTCGA ATCCAAGCGC ATCGACTACA AGAGCGCGAA ACAGATCGAA
CGCCCCCTCG AGATCCCGCC CGATCTCACC GCGCCGCAGC GCGACGACCG CTTCGCCGTG
CCCGATGTCG CCCCGCGCGG CGTCGCCACC TACTCCGCCT ACACGGCCGA TCGTGCCGGC
CAGCCGGCGC AGGCCTCCAG TGGTCCTGCG GTGCTCGCCA AGTCCGACAC CATGCGCATC
GAGCGCGCGG GCAGCCAGCG CTGGCTGGTG GTGGGTGGCA CGCCCGAGGA GCTGTGGCCG
CAGATCAAGG ATTTCTGGCT CGAACTCGGC TTCATCCTCA ACATCGACAG CCCGGAAATC
GGCGTCATGG AGACCGACTG GGCCGAGGAT CGCGCCAAGA TCCCGCAGGA TTTTCTCCGT
TCCAGCATCG GCAAGGTGCT CGACGGCCTG TTCTCGACCC CCGAGCGCGA CAAGTTCCGC
ACCCGCCTCG AGCAGGGCAA GGAGACGGGC ACGGTGGAGG TTTACATCTC GCACCGCGGC
ATGATGGAGA TCTACCCGAC CGAGGCCAAG GACTCGACGA TCTGGCAACC GCGTCCGGCC
GACCCCGAAC TCGAGGCCGA GATGCTGCGC CGCCTGATGG TCCGCCTCGG CGCGGAGGAA
GCGCGCGCGG AGGCCGCAAT CGCCACGCCG CAGCAGGCGT CGGAGCGGGC GCGTATCGCC
GCCGCGCCCG ACGGCCAGGT AATGCTGGTG ATGGACGAGG CCTTCGATCG TGCCTGGCGT
CGCGTCGGCC TCGCGCTCGA CCGCATCGGC TTCACGGTCG AGGACCGCGA CCGTGCGCAG
GGCTTGTACT TCGTGCGCTA CGTCGACCCG GATGCGGACA ACCGCAGCCC CGAGAAGGGC
TTCCTGTCGC GGCTTGCCTT CTGGCGCAGC GACGCCAAGC CGGCCGCCGG GGGGAGCGAA
TACCGTCTGC GCGTGCAGGG GCAGGGCGAG GCTTCGCGGG TCAGTGTGCT CACCCGCGAG
GGCGGGCTCG ACAACTCCGA CACTGCGCGC CGCATGCTGG GCCTGCTGCG CGAACAACTG
CGCTGA
 
Protein sequence
MIRSKRTSLS LLALSIALGG CSGSLLESKR IDYKSAKQIE RPLEIPPDLT APQRDDRFAV 
PDVAPRGVAT YSAYTADRAG QPAQASSGPA VLAKSDTMRI ERAGSQRWLV VGGTPEELWP
QIKDFWLELG FILNIDSPEI GVMETDWAED RAKIPQDFLR SSIGKVLDGL FSTPERDKFR
TRLEQGKETG TVEVYISHRG MMEIYPTEAK DSTIWQPRPA DPELEAEMLR RLMVRLGAEE
ARAEAAIATP QQASERARIA AAPDGQVMLV MDEAFDRAWR RVGLALDRIG FTVEDRDRAQ
GLYFVRYVDP DADNRSPEKG FLSRLAFWRS DAKPAAGGSE YRLRVQGQGE ASRVSVLTRE
GGLDNSDTAR RMLGLLREQL R