Gene Tmz1t_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2998 
Symbol 
ID7874388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3249771 
End bp3250379 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID643699919 
Productphenylacetic acid degradation protein PaaY 
Protein accessionYP_002889974 
Protein GI237653660 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID[TIGR02287] phenylacetic acid degradation protein PaaY 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTGCT ACGAAATCGA CGGCGTCCGC CCGGTCGTCC ATCCCACCGC CTACGTGCAT 
CCCGACGCCG TGCTGATCGG CGACGTGTTC GTCGGCGCCG GCTGCTACGT CGCCCCGCTC
GCCTCGCTGC GCGGCGACTT CGGCCGCATC GTGCTCGAGG AGGGCAGCAA TGTGCAGGAC
GCTTGCGTGC TGCACAGCTT TCCCGGCATC GACACCGTGG TCGAGGTCAA CGGCCATGTC
GGCCATGCCG CGGTGCTGCA CGCCTGTCGG ATCGGGCGCA ACGCGCTGGT CGGCATGAAC
GCGGTGGTGA TGGACCATGC GGAGGTGGGC GAAGGCAGCA TCATCGCCGC CGCCGCCTTC
GTGAAGGCGG AAATGAAGAT CCCTCCCGGC GTGCTGGTGG CGGGTGTGCC GGCCAAGGTG
CTGCGCGAGC TCACCGAGCA GGAGCGCAAG TGGAAGGTGA TCGGCACCGA CTGCTACCAG
AACCTCGCCC GCCGCAGCCT CGCCAGCCTG AAGCCCTGCG AACCGCTGCG CGAGGGCGAC
CGCGAGCGCG CGCGCTTCGA GATGCCCGAC GTCATGCCGC TGAGCGACGC GCGCCGGCGT
GCCGGCTGA
 
Protein sequence
MPCYEIDGVR PVVHPTAYVH PDAVLIGDVF VGAGCYVAPL ASLRGDFGRI VLEEGSNVQD 
ACVLHSFPGI DTVVEVNGHV GHAAVLHACR IGRNALVGMN AVVMDHAEVG EGSIIAAAAF
VKAEMKIPPG VLVAGVPAKV LRELTEQERK WKVIGTDCYQ NLARRSLASL KPCEPLREGD
RERARFEMPD VMPLSDARRR AG