| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2992 |
|---|
| Symbol | |
|---|
| ID | 7874382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3245216 |
|---|
| End bp | 3246289 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643699913 |
|---|
| Product | electron transport complex, RnfABCDGE type, D subunit |
|---|
| Protein accession | YP_002889968 |
|---|
| Protein GI | 237653654 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCT GGACCCCGAA CCGCTCCCCG GTGGCGGCGC CCCACGTGCA TGGGCGCAGC
AATATTCCGC AGGTCATGCG CACGGTCCTG CTCGCCCTGC TGCCGGCGAC CGCGACCGGC
GTGTTCCTGT TCGGCTGGCC GGCGCTCGCC ACCGTGCTGC TGGCGATCGC CGGCTGCGTG
GCGGCCGAGG CGGCGGCCCT GGCGATCGGC AAGCGCCCGC TGCGCCACAC GCTCGCCGAC
GGTTCGGCCG TGGTGACCGG GCTGATCCTC GCGCTCTGCC TGCCGCCGTG GGCACCGTGG
TGGCTGCCCC TGCTGGGCGG CGCGTTCGCG ATCGTGGTCG GCAAGCAGGT GTTCGGCGGC
CTCGGCCAGA ACGTGCTCAA CCCGGCGATG CTGGCGCGGG TCGCGCTGCT GGTGTCCTTC
CCGCTCGAGA TGACCGCCTG GGTGGCGCCG CAGCCGCTGT TCTCGCCCAC GGCGCCCGGC
CTGCTGGACG GCCTCGCGAT CACCTTCGGC GGTGGCGCGG TGCCGGACGC CATGAGCGCG
GCGACCGCGC TCGCCCCGCT CAAGCACGGC GGCGACTTCG CCGCCGGCGA GGCGCTGCTC
GCGCTCGCGC TCGGCACGGT GCCGGGCAGC CTGGGCGAGA CCTCCGCGCT CGCGCTGCTC
GCTGGCGGCG CCCTGCTGGT GGCGCGCCGC ATCGTGCCCT GGCAGATCCC CGCGGCCTTG
CTCGGCACGC TCGCGCTGCT CGCGGCATTG TTCAACCAGA TCGACCCCGC GCACTACCCG
CCGCCGCTGC TCCACCTGCT CGGCGGCAGC GCGGTCATGT GCGCGTTCTT CATCGCCACC
GATCCGGTGG GCGCCCCGGT CACCCCGCTC GGGCGGGCGA TCTTCGGCGC GGGCATCGGC
GCGCTGATCT ACGTGATCCG TACCTGGGGC GGCTATCCCG AGGGGGTCGC CTTCGCGGTC
CTGCTTATGA ACGCGGCGAC GCCGCTGATC GATCGCCTGG TGCGTCCGCG CCGCTACGGC
CGCCTGCGCA CGGGCAACCC GATCCCCCTG GCCCCGAAGG AGGATGGCCG ATGA
|
|---|
| Protein sequence | MTSWTPNRSP VAAPHVHGRS NIPQVMRTVL LALLPATATG VFLFGWPALA TVLLAIAGCV
AAEAAALAIG KRPLRHTLAD GSAVVTGLIL ALCLPPWAPW WLPLLGGAFA IVVGKQVFGG
LGQNVLNPAM LARVALLVSF PLEMTAWVAP QPLFSPTAPG LLDGLAITFG GGAVPDAMSA
ATALAPLKHG GDFAAGEALL ALALGTVPGS LGETSALALL AGGALLVARR IVPWQIPAAL
LGTLALLAAL FNQIDPAHYP PPLLHLLGGS AVMCAFFIAT DPVGAPVTPL GRAIFGAGIG
ALIYVIRTWG GYPEGVAFAV LLMNAATPLI DRLVRPRRYG RLRTGNPIPL APKEDGR
|
|---|
| |