| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2966 |
|---|
| Symbol | |
|---|
| ID | 7874356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3209007 |
|---|
| End bp | 3210362 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643699887 |
|---|
| Product | thiamine pyrophosphate protein domain protein TPP-binding |
|---|
| Protein accession | YP_002889942 |
|---|
| Protein GI | 237653628 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.451629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAAG CCTACTCCAC CATCGCCTTC GACCCCGCCA AGTGCGACGG CTGCGGCAAA
TGCATGACGG CGTGCGCGAG CGTCAAGTTC GACTCCACCG ACACCACGCG CTCGCTGATC
CAGATCGTGC GCAGCGGCGG CGCCCGCATC GAGCCGCCCC GCCCGGGCGA GTTCGAGCTC
GCGCTGTGCC GCCAGTGCGC CGATCCCAAG TGCGTCACCG TGTGCCCGGC GGGCGCGCTC
GGCAAGAACG GCGCCACCGG CGTGATCGAC TGGGACGCCT CGAAGTGCGT CGACTGCCTG
CTGTGCACCA TCGGCTGCAC CTACGCCGGC ATCGCGCTCG ACGAGCACAG CGGCCGTGTC
AGCAAGTGCG ACACCTGCGA GGGCAAGCCG GCCTGCGTGC CCGCCTGCCC CACCGGCGCG
CTGCGCCACA TCACCACCGC GCGCATCTAC AACGAGGTCG GCAGCTGGGA AGACCTGTTC
GCACCCGGCC TGGCGGGCTG CCAGGGCTGC AACACCGAGC TGCTGATGCG CCACGCGCTG
CGCCGCGTCG GCCCCGACAC CGTGCTCGCC ACCCCGCCGG GCTGCGTGCC CGGCATGGGC
TCGGTGGGCT TCAACGGCAC CACCGGCACC AAGGTCCCGG TCTTCCACCC GCTGCTCACC
AACACCGCGT CGATGCTCGC CGGGGTCAAG CGCCAGTACG AGCGCGTCGG CCGCAAGGTC
ACCGCGATGG CGATCGCCGG CGACGGCGGC GCCTCGGACG TCGGCTTCCA GTCGCTCTCG
GGCGCGGCCG AGCGCGGCGA GCGCATCCTC TTCATGGTGG TCGACAACGA GGGCTACATG
AACACCGGCA TGCAGCGCTC GAGCTGCACG CCCTACGGCG CATGGACCTC GACCACCCCG
ATCGGCGCAC ATGGCCGCGG CAAGACGCAA GACGCCAAGA ACCTGCCGAT GATCATGGTG
AACCACCGCT GCGAATACGT CGCCACCGCG TCGACCGCGT ACATGGAGGA CCTCTACGAG
AAGCTCGACA AGGCCCTCGC CGCCTCCGAG CGGGGCTTCG CCTACCTGCA CGTGTATTCG
CCCTGCACCA CCGGCTGGCG CTTCCAGAGC GCGCTCAACA TCGAGGTCGC GCGCAAGGCG
GTGGAGTCGA ACTTCGTCAC CCTGTGGGAA TACACCCCCG AGGCCGGGCT GCACTTCACC
CGCCCGGTGG ACAAGCCGCT GCCGGTGGCC GACTACCTCA AGGCCATGGG GCGCTTCCGC
CACCTCAGCC CGGAGCAGGT CGAGCACATC CAGAACAAGG TGGCCGAGAA CCTGCGCTTC
GTGCGCAAGA TCGCGGAGCA GGCCGATGAG CAATGA
|
|---|
| Protein sequence | MGQAYSTIAF DPAKCDGCGK CMTACASVKF DSTDTTRSLI QIVRSGGARI EPPRPGEFEL
ALCRQCADPK CVTVCPAGAL GKNGATGVID WDASKCVDCL LCTIGCTYAG IALDEHSGRV
SKCDTCEGKP ACVPACPTGA LRHITTARIY NEVGSWEDLF APGLAGCQGC NTELLMRHAL
RRVGPDTVLA TPPGCVPGMG SVGFNGTTGT KVPVFHPLLT NTASMLAGVK RQYERVGRKV
TAMAIAGDGG ASDVGFQSLS GAAERGERIL FMVVDNEGYM NTGMQRSSCT PYGAWTSTTP
IGAHGRGKTQ DAKNLPMIMV NHRCEYVATA STAYMEDLYE KLDKALAASE RGFAYLHVYS
PCTTGWRFQS ALNIEVARKA VESNFVTLWE YTPEAGLHFT RPVDKPLPVA DYLKAMGRFR
HLSPEQVEHI QNKVAENLRF VRKIAEQADE Q
|
|---|
| |