| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2934 |
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| Symbol | |
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| ID | 7873836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3173947 |
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| End bp | 3174720 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643699855 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_002889910 |
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| Protein GI | 237653596 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.142861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGACG CACACGGTAA GCTCGACAAG GGTGGCCTCG TCGAGAACTA CGCCCCGCTG
GTCAAGCGCA TCGCCTACCA GTTGATGTCG CGCCTGCCCG CCAGCGTGGA TGTGGACGAC
CTGATCCAGA ACGGCATGAT GGGCCTGCTC GATGCCCTCG GCCGCTACGA GCAGGGCCTC
GGCGCCCAGT TCGAGACCTA TGCGGTGCAG CGCATCCGCG GCGCCATGCT CGACGGCCTG
CGCGAGAACG ACTGGCTGCC GCGCAGCCTG CGCCGCGACA TGCGCCGCAT CGAGGCGGCG
ATCCACAGCC TGGAGCAGCA GAACGGCCGC CCGCCCTCCG AGAGCGAGCT CGCCGCCGCG
CTCGACCTGC CGCTGGAGGA TTACCAGCGC ATGCTGCAGG ACGCGCGCGG CCACCAGCTC
GTCTATCTCG AGGATTTCAA CCGCGAGGAA GACGACGACT ATCTCGACCG CCATCTCGCC
CAGGAGGGCA ACGATCCGCT CACCCTGCTC GAGGACACCG ACCTGCGCCG CCGCCTGGTC
GGGGCGATCG AGCACCTGCC CGAGCGCGAG CAGCTGGTGA TGGCGCTGTA TTACGACGAG
GAGCTCAACC TGCGCGAGAT CGGCGAGGTG CTCGGCGTCA CCGAGTCGCG CGTGTGCCAG
CTGCACAGCC AGGCGGTGGC TCGCCTGCGC GCCTGCGTCT TCGAGGGCGG CACGGCGATG
CCGGTCGCGC GCCGGCGCGG GCGCCCACCC AAGAACGCGG CCGCGGGCCG CTGA
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| Protein sequence | MYDAHGKLDK GGLVENYAPL VKRIAYQLMS RLPASVDVDD LIQNGMMGLL DALGRYEQGL
GAQFETYAVQ RIRGAMLDGL RENDWLPRSL RRDMRRIEAA IHSLEQQNGR PPSESELAAA
LDLPLEDYQR MLQDARGHQL VYLEDFNREE DDDYLDRHLA QEGNDPLTLL EDTDLRRRLV
GAIEHLPERE QLVMALYYDE ELNLREIGEV LGVTESRVCQ LHSQAVARLR ACVFEGGTAM
PVARRRGRPP KNAAAGR
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