| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2825 |
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| Symbol | |
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| ID | 7873233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3059034 |
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| End bp | 3060464 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 643699746 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002889801 |
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| Protein GI | 237653487 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.292175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGTTC CCGCCGCGTC CGCCCTGCCT TGCCCCGACC TCCGAGCCCC GTCCGCGGAA
CCCCGCCGGA CCTGCCCGAG CCGGTCGGCG CCGGCCGGGC GGCACGACGC GGCCCTCGTA
CCCGCAGCAG CAAACCCAGC CCGCGGCATC GACAGCGGAG CCACGATCAT CCTGAACACA
CCCGGCAAGA CCCCCGACGA TCCTCTCCGC GCCGGCCGCC CCTCCACCCT GCGACGCCTG
CTCGGCTCGC GCGCGGGCGT CGGCGCGGGC GTGCTGGCGA TCTCCGCGCT CGCCTTCGCC
ACCTTCCACC ACGAGACGGT GAACGTGGCC CTCGTCGAGG AGGGACCGCT GCGCCAGGCG
ATCGTGGCGA GCGGGCGGGT GCGCACGCCC GAGCGCATCG TGGTATCGGC GCAGATCGCC
GGGCGCGTGC AGGCGGTGGA GGTGCGCGAG GGCGACGCGC TGGCGCCGGG CCAGGCGCTG
CTGCGCCTGG ACGAGCGCGA GTGGGGGGCG GCCGTCGCCC AGGCCGGCGC CGCCGTGGTG
CAGGGCGAGG CGCGCCTGCG CCAGCTGCGC GAGCTCGGCC TGCCGGTGGC CGAACAGGCG
CTGCGCCAGG CCGAGGCCAC GGCGCTGCAG GCGCAGCGGC ACCATCGGCG CGTGCAGGAG
CTCGTCGCGC GCGGCTTCTA CAGCCAGGCA CAGCTCGACG AGGCGCGCCG GGCGCTCGAC
GTGGCCGACA GCCAGGTCCG CAGCGCCCGC CTGCAGCGCG CCAGCCAGCA GCCTGGCGGC
AGCGAGATCG AGCTCGCGCG CAGCGCCCTG GAACAGGCGC GCGCGGCGCT GGCCGCGGCG
GAGACCCGGC TGAGCTACGC GACCCTGCGC GCCCCGGTCG CGGGGACCGT GCTGACCCGC
AACGTCGAGG CCGGCGACAC CGTGCAGCCA GGCACGCCGC TGATGACGAT CGCCCCGGCC
GGCGCCACCG AGCTCACCGT GCAGATCGAC GAGAAGAACC TCGCCCTGCT TCACCCCGGC
CAGGCCGCGC TGGCCTCGGC CGATGCCTAC CCGGGCGAGC GCTTCGCCGC CGTGCTCGCC
TACATCGCCC CCTCGGTGGA CGCCCAGCGC GGCTCGGTGG AGGTCCGCCT GCGCGTACCC
GAGCCGCCGC CCTACCTGCG CCACGAGATG ACGGTATCGC TCGACATCGA GGCGGCGCGG
CGCGAGCGCA CGCTGGCCGT GCCCGCCGCG GCGGTACGCG AGTCCGGCGG GGCGCAGCCC
TGGGTGCTGG TGGTGCGCGA CGGCCGTACC GCACGCCAGC CGGTGCGGCT GGGCATCCGC
GGCGCCGGCA GGGTGGAGGT GCTCGAGGGC CTCGCCGCCG GCGAGGCCGT GGTGCCGGCG
CCGGCCGACG TGCCCGCAGG GCGGGCGGTG CGGACGCGCG TGCAGCCATG A
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| Protein sequence | MGVPAASALP CPDLRAPSAE PRRTCPSRSA PAGRHDAALV PAAANPARGI DSGATIILNT
PGKTPDDPLR AGRPSTLRRL LGSRAGVGAG VLAISALAFA TFHHETVNVA LVEEGPLRQA
IVASGRVRTP ERIVVSAQIA GRVQAVEVRE GDALAPGQAL LRLDEREWGA AVAQAGAAVV
QGEARLRQLR ELGLPVAEQA LRQAEATALQ AQRHHRRVQE LVARGFYSQA QLDEARRALD
VADSQVRSAR LQRASQQPGG SEIELARSAL EQARAALAAA ETRLSYATLR APVAGTVLTR
NVEAGDTVQP GTPLMTIAPA GATELTVQID EKNLALLHPG QAALASADAY PGERFAAVLA
YIAPSVDAQR GSVEVRLRVP EPPPYLRHEM TVSLDIEAAR RERTLAVPAA AVRESGGAQP
WVLVVRDGRT ARQPVRLGIR GAGRVEVLEG LAAGEAVVPA PADVPAGRAV RTRVQP
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