Gene Tmz1t_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2817 
Symbol 
ID7873225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3045174 
End bp3046982 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content68% 
IMG OID643699738 
ProductPQQ-dependent dehydrogenase, methanol/ethanol family 
Protein accessionYP_002889793 
Protein GI237653479 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGA ACGACAGACG CGCGCGCACC CTGCCGGCGA TGCTGACCGC CCTGACGGTC 
GCGCTGGCCG CGGCGGGCAT GGGCGCCACG GCGCAGGCCG CGAGCGTGAG CGACGAGGAC
ATCCTGAAGG ATGCCGAGAC GACGCATCAG GTCGTCACCA ACGGCCTCGG CACCAAGGGT
CAGCGCTACA GCCCGCTCGC CAAGGTCAAT GTCGACACCG TGAAGGACCT CGTCCCGGTG
TGGGCCTTCT CCTTCGGCGG CGAGAAGCAG CGCGGCCAGC AGTCGCAGCC GTTGATCCAC
GACGGCAAGA TGTTCGTGAC CGCGTCCTAC AGCCGCATCT ACGCGCTCGA CGCCAAGACC
GGCCAGAAGC TGTGGAAGTA CGAGCACCGC CTGCCCGAGG GCATCATGCC GTGCTGCGAC
GTGATCAACC GCGGCGCCGC GCTCTACGGC GACCTGGTGA TCTTCGGCAC CCTGGACGCG
CAGCTCGTCG CGCTCAACCG CGACACCGGC AAGGTGGTGT GGCGCGAGAA GATCGACGAC
TACAAGGCCG GCTACTCGAT GACCGCCGCG CCGCAGATCG TCAAGGGCAT GGTGATCACC
GGGGTGTCGG GCGGCGAGTT CGGCGTCGTC GGCCGCGTCG AGGCGCGCGA CGCCAAGACC
GGCAAGAAGG TCTGGGTGCG CCCGGTGGTC GAAGGCCACA TGGGCTACAA GTACGACAAG
GACGGCAAGG AGATCGAGAA CGGCATCTCG GGCACGACCA ACGCCACCTG GCCGGGCGAC
CTGTGGAAGA CCGGCGGCGC CGCGACCTGG CAGACCGCCT ACTACGATCC GGACGTGAAC
CTGATCTTCA TGGGCACCGG CAACCCGGCG CCGTGGAACT CCTGGCTGCG TCCGGGCGAC
AACCTGTACT CGTCGTCCAC GGTCGCGGTC GACCCGGACA CCGGCAAGAT CGTCTGGCAC
TACCAGAACA CGCCGCACGA CGGCTGGGAC TTCGACGGGG TGAACGAATT CATCGCCTTC
GAGTACAAGG ACCCGAAGAG CGGCAAGCTC GTCAAGGCGG GCGCCAAGGC CGACCGCAAC
GGCTTCTTCT TCGTCAATGA CCGGACCAAC GGCAAGCTGC TCGCCGCCTA CCCCTTCCTG
ACCCGCATCG ACTGGGCCAA GGGCTACGAC CTCGAGACCG GTCGTCCGAT CACCAACGAC
GACAAGCGTC CGCCCAATCC GTTTGCCGAG GGCGCGGCCG GCGAGGGCGG CAAGGGCAAG
CCGGTGTTCG CCGCGCCGTC CTTCCTCGGC GGCAAGAACC AGATGCCGAT GGGCTACAGC
CCGGACACCG GCCTGTTCTA CGTGCCCGCC AACGAGTGGG GCATGGACAT CTGGAACGAG
CCGGTGAGCT ACAAGCGCGG CGCGGCCTAC CTGGGCGCGG GCTTCACCAT CAAGCCGCTG
TACGAGGACT ACATCGGCGC GATGCGCGCG ATCGACCCGG TGAGCGGCAA GATCGTCTGG
GAGGTCAAGA ACAACGCGCC GCTGTGGGGC GGGGTGCTCA GCACCGCCGG CAACCTGGTG
TTCTATGGCA CGCCCGAGGG CTACCTGAAG GCGGTCAACG CGAAGACCGG CGAGGAGGCG
TGGAAATTCC AGACCGGCTC GGGCGTGATC GCGCCGCCGG TGACCTGGGA AGCCGACGGC
GAGCAGTACG TCGCGGTGGT GTCGGGCTGG GGCGGGGCGG TACCGCTGTG GGGCGGCGAC
GTCGCCAAGC GGGTGAACTT CCTCGAGCAG GGCGGCACCG TGTGGGTGTT CAAGCTGCAC
AAGAGCTGA
 
Protein sequence
MMKNDRRART LPAMLTALTV ALAAAGMGAT AQAASVSDED ILKDAETTHQ VVTNGLGTKG 
QRYSPLAKVN VDTVKDLVPV WAFSFGGEKQ RGQQSQPLIH DGKMFVTASY SRIYALDAKT
GQKLWKYEHR LPEGIMPCCD VINRGAALYG DLVIFGTLDA QLVALNRDTG KVVWREKIDD
YKAGYSMTAA PQIVKGMVIT GVSGGEFGVV GRVEARDAKT GKKVWVRPVV EGHMGYKYDK
DGKEIENGIS GTTNATWPGD LWKTGGAATW QTAYYDPDVN LIFMGTGNPA PWNSWLRPGD
NLYSSSTVAV DPDTGKIVWH YQNTPHDGWD FDGVNEFIAF EYKDPKSGKL VKAGAKADRN
GFFFVNDRTN GKLLAAYPFL TRIDWAKGYD LETGRPITND DKRPPNPFAE GAAGEGGKGK
PVFAAPSFLG GKNQMPMGYS PDTGLFYVPA NEWGMDIWNE PVSYKRGAAY LGAGFTIKPL
YEDYIGAMRA IDPVSGKIVW EVKNNAPLWG GVLSTAGNLV FYGTPEGYLK AVNAKTGEEA
WKFQTGSGVI APPVTWEADG EQYVAVVSGW GGAVPLWGGD VAKRVNFLEQ GGTVWVFKLH
KS