| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2787 |
|---|
| Symbol | |
|---|
| ID | 7873196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3016349 |
|---|
| End bp | 3017848 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643699709 |
|---|
| Product | leucyl aminopeptidase |
|---|
| Protein accession | YP_002889764 |
|---|
| Protein GI | 237653450 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.151843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTA CCATAAAGAC CGGCAGCCCG GCCAAGCTCA AGACTGGCCT GCTGGTACTC
GGCGCGTTTG CCGAAGGCCG TCTCCCCGCC CTCTCGGCCG CGGCCGACGG TGCTGCCGAA
GGCCGCCTGG CCGCCCTGAT CAAGCGTGGC GACCTCGAGG ACAAGGCGGG CGCCACGCTG
CTGGTGCATG ACCTGCCCGG CGTGCACGCC GAGCGCGTGC TGCTGGTGAG CCTGGGCAAG
CACGACGAGT TCGGCGACAA GGCGTACCGC GACGCGCTCG CCGCCGCGGC GAAGGCGATC
TCCGCCGGGC CGGCGAAGGA CGCCGTGGTC GCGCTCGCCG ACGCAGAGCT CTCCGGTCGC
GACATGGCGT GGCGGCTGCA GCAGGCCGCG CGCATCCTCG CCGACGGCGC CTACCGCTTC
GACGCACTCA AGTCCGACAA GAAGACCCGG AAGGAGCGTG GCGCGAAGAA GCTCTGCCTG
CTGGTGAGCT GCGAGCTCGG CGCCGAGCTC GACACCGCCG TCCTGCAGGG CCACGCGATC
GCCAGCGGCA TGGCGCTGGC GAAGGACCTC GGCAACCTGC CCGGCAACCA CTGCACTCCC
ACCCACCTGG CGGAAACGGC CGAGTCCCTG GGCAAGCAGT ACAAGTTCGA CGTCGAGGTG
CTCGAGCGCG ACGACATGGA GAAGCTCGGC ATGGGCTCCT TCCTGTCCGT GGCGCGCGGC
TCGCACCAGC CGCCCAAGTT CATTGTCATG CACTACAAGG GCGGCAAGGC CAAGGCGAAG
CCGGTCGTGC TCGTCGGCAA GGGCATCACC TTCGACACCG GCGGCATCTC GCTCAAACCC
GCAGCCGAGA TGGACGAGAT GAAGTTCGAC ATGTGCGGCG CCGCGAGCGT GCTCGGCACC
TTCAAGGCGG TCGCGCAGAT GGGCCTGCCG ATCAACCTGG TCGGCCTCGT CCCCACGACC
GAGAACATGC CCGGCGGCGG CGCCACCAAG CCCGGCGACG TCGTCACTTC GATGTCGGGG
CAGACCATCG AGGTGCTCAA CACCGACGCC GAGGGCCGCC TGATCCTGTG CGACGCGCTC
ACCTACGCCG AGCGCTTCAA GCCCGAGTGC GTGATCGACA TCGCCACGCT CACCGGCGCC
TGCGTGGTCG CGCTCGGCAA GATCCCGAGC GGACTGCTCG CCAACGACGA CGAGCTCGCC
GCCGAGATCC TGCGCCGTGG CACCGAGTCG GGTGACCGCG CCTGGCAGCT GCCGCTGTGG
GACGAATACC AGGAACTGCT CAAGAGCAAC TTCGCCGACA TGGGCAACAT CGGCGGCCGT
TACGCCGGCA CGATCACCGC GGCCTGCTTC CTGTCGCGCT TCGCCAAGGC CTACAAGTGG
GCCCACCTCG ACATCGCCGG CACCGCCTGG GTGTCGGGCG ATGCCAAGGG CGCGACCGGC
CGCCCGGTGC CGCTGCTGAG CAGCTTCCTG ATCGGGCGCG CCCGCGCCCA TGCGGCCTGA
|
|---|
| Protein sequence | MEFTIKTGSP AKLKTGLLVL GAFAEGRLPA LSAAADGAAE GRLAALIKRG DLEDKAGATL
LVHDLPGVHA ERVLLVSLGK HDEFGDKAYR DALAAAAKAI SAGPAKDAVV ALADAELSGR
DMAWRLQQAA RILADGAYRF DALKSDKKTR KERGAKKLCL LVSCELGAEL DTAVLQGHAI
ASGMALAKDL GNLPGNHCTP THLAETAESL GKQYKFDVEV LERDDMEKLG MGSFLSVARG
SHQPPKFIVM HYKGGKAKAK PVVLVGKGIT FDTGGISLKP AAEMDEMKFD MCGAASVLGT
FKAVAQMGLP INLVGLVPTT ENMPGGGATK PGDVVTSMSG QTIEVLNTDA EGRLILCDAL
TYAERFKPEC VIDIATLTGA CVVALGKIPS GLLANDDELA AEILRRGTES GDRAWQLPLW
DEYQELLKSN FADMGNIGGR YAGTITAACF LSRFAKAYKW AHLDIAGTAW VSGDAKGATG
RPVPLLSSFL IGRARAHAA
|
|---|
| |