Gene Tmz1t_2663 details

Gene Information

• Locus tag: Tmz1t_2663
• ID: 7873405
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 2888049
• End bp: 2888477
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643699586
• Product: type IV pilus biogenesis protein PilE
• Protein accession: YP_002889642
• Protein GI: 237653328
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.839094
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAACACG CCTCCCGCAC CCGCGGCTTC ACGCTGATCG AACTGATGAT CGTGGTCGCC 
ATCATCGGCA TCCTCGCCTC GATCGCCCTG CCCGCCTACT CCGACTACAT CCGCCGCTCG 
AAGATCGTCG AGGCGACCTC GGTGCTGTCC GACCTGCGCG TGCGCATGGA GCAGTTCTAC 
CAGGACAACC GCAGCTACGT GTCGACCGGC ACCACCTGCG GCGTCGCCAT GCCCACACAG 
CAGTTCTTCA CGATGAGTTG CACCGGCACC AGCACCACCT ACACGCTGAC CGCGACCGGC 
AAGTCCGGCA CGGACGTGGC AGGGTTCACG TACACGCTGA ACCAGCAAAA CGTCCGCGCG 
ACAACCGGCG GCAGCTTCGG CACCAGCACG ACCTGCTGGG TCGGCAAGAG GGGAGGCGGC 
TGTCTATGA 

 

Protein sequence

MKHASRTRGF TLIELMIVVA IIGILASIAL PAYSDYIRRS KIVEATSVLS DLRVRMEQFY 
QDNRSYVSTG TTCGVAMPTQ QFFTMSCTGT STTYTLTATG KSGTDVAGFT YTLNQQNVRA 
TTGGSFGTST TCWVGKRGGG CL