| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2438 |
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| Symbol | |
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| ID | 7874122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2627515 |
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| End bp | 2629602 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643699359 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002889418 |
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| Protein GI | 237653104 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.615345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTC AAGGCAATAG CGCCGGAAAC GATGCACCGC AGCAAGGCGG GACCGTGCTC
GGCTTCGAGG GCAGCCCCTT CCGCCTGCAC CAGCCGTTTC CGCCCGCCGG CGACCAGCCC
GAGGCGATCC GCCTGCTGTG CGAAGGCGTC GAGGACGGCC TGATGTATCA GACCCTGCTC
GGCGTGACCG GCTCGGGCAA GACCTACACC ATGGCCAACG TCATCGCCCG CATGGGGCGA
CCGGCCCTGG TGCTGGCGCC CAACAAGACG CTGGCCGCGC AGCTCTACGC CGAGTTCAAG
GAGTTCCTGC CCGAGAACGC GGTCGAGTAC TTCGTCAGCT ACTACGACTA CTACCAGCCC
GAGGCCTACG TGCCCTCGCG CGACCTTTTC ATCGAGAAGG ATTCGTCGAT CAACGAGCAC
ATCGAGCAGA TGCGCCTGTC GGCGACCAAG AGCCTGATGG AGCGCCGCGA CGTGGTCATC
GTGGCCACGG TGTCGTGCAT CTACGGCATC GGCGATCCGG TCGACTACCA CGCCATGATC
CTGCACCTGC GCGAGGGCGA GCGCATGGCG CACCGCGACC TCATCCAGCG CCTGGTGGCG
ATGCAATACA CCCGCGCCGA CATCGACTTC CGCCGCGGCA CCTTCCGCGT GCGCGGCGAT
GTGATCGACG TCTTCCCGGC GGAAAACGCC GAGCTCGCGG TGCGCATCGA GATGTTCGAC
GACGAGATCG AACACCTGAC CCTGTTCGAT CCGCTCACCG GACACCTCAG GCACAAGCTG
GCGCGCTTCA CCGTCTATCC GTCCAGCCAC TACGTGACCC CGCGCGCGAC GGTGCTGCAG
GCGATCGAGG CGATCAAGGA GGAGTTGAAG GAGCGCGTCG CCTTCTTCCA GCGCGAGGGC
AAGCTGGTGG AGGCGCAGCG CATCGAGCAG CGCACCCGCT TCGACCTCGA GATGTTGAAC
GAGATGGGCT TCTGCAAGGG CATCGAGAAC TACTCCCGGC ACCTGTCCGG GCGCGGTCCG
GGCGAGCCGC CGCCGACGCT GATCGACTAC CTGCCGCAGG ATGCGCTGAT GTTCATCGAC
GAGTCGCACG TCGCCATCGG CCAGGTCGGC GGCATGTACA AGGGCGATCG CTCGCGCAAG
GAGAACCTCG TCGGCTATGG CTTCCGCCTG CCCTCGGCGC TGGACAACCG GCCGCTCAAG
TTCGACGAGT TCGAGCGCCT GATGCCGCAG ACCGTCTTCG TGTCGGCAAC CCCGGCGAAA
TACGAGGAAG AGCACCAGGG CCAGGTGGTG GAGCAGGTGG TGCGCCCGAC CGGCCTGATC
GACCCCATGG TTGAGGTGCG CCCGGCGATG ACGCAGGTGG ACGACCTGCT CGGCGAGATC
AAGAAGCGCC TGGCGGTAAA CGAGCGCGTG CTGGTCACCG TGCTGACAAA GCGCATGGCC
GAGGACCTCA CCGACTACCT CGCCGACAAC GGCATCCGCG TGCGCTACCT GCACTCGGAC
ATCGACACCG TGGAGCGCGT GGAGATCATC CGCGACCTGC GCCTGGGCGA GTTCGACGTG
CTGGTGGGCA TCAACCTGCT GCGCGAGGGC CTGGACATCC CCGAGGTGTC GCTGGTGACG
ATCCTGGACG CGGACAAGGA GGGCTTCCTG CGTTCCGCGC GTTCGCTCAT CCAGACCATC
GGCCGCGCCG CGCGCCACCT GCACGGCACC GCCATCCTCT ACGCCGACCG CATCACCGAC
TCGATGAAGG CGGCGATCGG CGAGACCGAG CGTCGCCGCA ACAAGCAGAT CGCCTTCAAC
GAGGCCAATG GCATCGTGCC GAAGTCGGTG ACGAAACGGA TCAAGGACAT CATCGACGGG
GTCTATGATT CCGATGGGGC CAAGCGCGAC GCCGCACGCG TGGCCGACAA GGGCAGCGAC
TACGCGGTGA TGGACGAGAA GGCGCTGGCG CGGGCGATCA AGCGGCTGGA GAAGGAGATG
CAGGAGCACG CCCGCAACCT CGAGTTCGAG AAGGCGGCGG CGGCGCGCGA CGAGCTCTTC
AAGCTGCGCG AGCGCGCCTT CGGCGCCGAC CAGCATGGCA GCGTGTGA
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| Protein sequence | MTTQGNSAGN DAPQQGGTVL GFEGSPFRLH QPFPPAGDQP EAIRLLCEGV EDGLMYQTLL
GVTGSGKTYT MANVIARMGR PALVLAPNKT LAAQLYAEFK EFLPENAVEY FVSYYDYYQP
EAYVPSRDLF IEKDSSINEH IEQMRLSATK SLMERRDVVI VATVSCIYGI GDPVDYHAMI
LHLREGERMA HRDLIQRLVA MQYTRADIDF RRGTFRVRGD VIDVFPAENA ELAVRIEMFD
DEIEHLTLFD PLTGHLRHKL ARFTVYPSSH YVTPRATVLQ AIEAIKEELK ERVAFFQREG
KLVEAQRIEQ RTRFDLEMLN EMGFCKGIEN YSRHLSGRGP GEPPPTLIDY LPQDALMFID
ESHVAIGQVG GMYKGDRSRK ENLVGYGFRL PSALDNRPLK FDEFERLMPQ TVFVSATPAK
YEEEHQGQVV EQVVRPTGLI DPMVEVRPAM TQVDDLLGEI KKRLAVNERV LVTVLTKRMA
EDLTDYLADN GIRVRYLHSD IDTVERVEII RDLRLGEFDV LVGINLLREG LDIPEVSLVT
ILDADKEGFL RSARSLIQTI GRAARHLHGT AILYADRITD SMKAAIGETE RRRNKQIAFN
EANGIVPKSV TKRIKDIIDG VYDSDGAKRD AARVADKGSD YAVMDEKALA RAIKRLEKEM
QEHARNLEFE KAAAARDELF KLRERAFGAD QHGSV
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