Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2312 |
Symbol | rnc |
ID | 7085299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 2603513 |
End bp | 2604181 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643699333 |
Product | ribonuclease III |
Protein accession | YP_002355947 |
Protein GI | 217970713 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.842494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGATC GACTTCAGGC GCGCCTGGGC CACGCGTTCT CCGATGTCCG CCTGCTGCAG GAGGCGCTGA CCCATCGCAG CTTCGGGCAG CCCAACAACG AGCGTTTCGA GTTCCTCGGC GACGCCGTCC TCGACTGCGT GGTGTCGATC GCGCTGTTTG GCCGCTTCGG CGAGCTGCGC GAGGGAGAGC TGTCGCGGGT GCGCGCCTCG CTGGTGCGCC AGGACACGCT GCACCGCCTC GCGCTCGAGC TCGAGCTCGG CGACTGCCTG CGCCTGGGCG AGGGCGAGCT CAAGTCCGGC GGCAGCCGGC GCCCGTCCAT CCTCGCCGAT GCGCTCGAAG CGCTGTTCGC CGCGGTCTAT CTGGACGCCG GCTTCGAAGC GGCGAAGGGG GTCATCGACC GCCTCTACGC ACCGCTGATC GCCGAAGTCG ATCCGTGCAA GCCGAGCAAG GACCCCAAGA CCGCGCTGCA GGAATGGCTG CAGGCGCGCC GCATTCCGGT GCCGAGCTAC ACCATGGTCG AGATCGTCGG CGAAGCCCAC GCGCAGGAGT TCGAGGTCGC CTGCGAAATC CCCAAACTCG CGGTACGCAC GCTGGGCCGC GGCCCGAGCC GGCGCATCGC CGAACAACAG TCGGCCGAGC TCGCGCTCGC CGCGGTGAGA AAGAAATGA
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Protein sequence | MPDRLQARLG HAFSDVRLLQ EALTHRSFGQ PNNERFEFLG DAVLDCVVSI ALFGRFGELR EGELSRVRAS LVRQDTLHRL ALELELGDCL RLGEGELKSG GSRRPSILAD ALEALFAAVY LDAGFEAAKG VIDRLYAPLI AEVDPCKPSK DPKTALQEWL QARRIPVPSY TMVEIVGEAH AQEFEVACEI PKLAVRTLGR GPSRRIAEQQ SAELALAAVR KK
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