| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2306 |
|---|
| Symbol | uvrC |
|---|
| ID | 7085293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2597424 |
|---|
| End bp | 2599241 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643699327 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_002355941 |
|---|
| Protein GI | 217970707 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.391453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CGACGCCCGC CCCCGCCTTC GACCCCAAGC CCTTCCTGCG CACCCTGACC
GAGGAGCCGG GCGTCTATCG CATGATCGGC GCCGACGACA AGGTGCTCTA CGTCGGCAAG
GCGAAGAACC TCAAGCGTCG CGTCTCCAGC TACTTCCAGA AGACCGTCTC CAGCCCGCGC
ATCGCGATGA TGGTGGCGCA GGTGCTGCGC GTGGACATCA CCGCCACACG CTCCGAGGCC
GAGGCGCTGA TCCTCGAGAA CAACCTCATC AAGAGCCTCG CGCCGCGCTA CAACATCCTC
TTCCGCGACG ACAAGACCTA CCCCTACATC GAGCTCTCCG CCGACGAGTT CCCGCGCCTG
GCCTACCACC GCGGCGCCTT CACCAAGGGC GCGCGCTACT TCGGCCCCTT CCCGAACGCC
TGGGCGGTGC GCGAGAGCAT CCATCTGCTG CAGAAGACCT TCCAGCTGCG CACCTGCGAG
AACACCGTCT TCGCCAACCG CTCGCGCCCC TGCCTGCTGC ACCAGATCAA GCGCTGCACC
GCGCCCTGCG TCAGTCTTGT CGAGCCCGCC GCCTACGCTG CGGACGTGAA GCTCGCCACG
CGCTTCCTCG ACGGCCAGGC GAGCGAGGTG ATCGACGACC TCACGAATCG CATGCAGGCC
GCCGCCGAGC GCCTCGCCTT TGAGGAGGCC GCGGCCTGTC GCGATCAGGT GCGCGTGCTG
CAGGCGGTGC TGCACAAGCA GTTCGTCGAC AGCCGCAAGG ATGAAGATGT GGACGTGCTC
GCCGCGATCG AGGCCGACGG ACTCACCTGC GTGAACATCG CCATGGTGCG CGGCGGCCGC
CATCTCGGCG ATCGCCCGCA GTTCCCGAGC GGTGCGGCGG TGTCGGGTGC GGTGGACAGC
CTGCTCGCCT TCGTCGAGCA GCACTACAGC CAGCACCCGA TCCCGGCGCG CATCCTGGTC
AACCTGCCGC CGGAGGCGGT CAAGGAGACG CTCGCCGAGA TCACCGAGCG TCCGCCCGGC
GTGGTGTCGC CGCGCTTCGA GGCGGAAAAG GCGTGGATGG AGATGGCAGA GAAGAACGCC
CACCTCGCCA TCCAGGCGCG CGCGCGCGAC ACCGGCCGCA TCGAACAGCG TCTCGAGGCC
CTGCGCGAGG CGCTCGGCAT GGACGAGGCG CCGCAGCGCA TCGAATGCTT CGACATCAGC
CACACCATGG GCGAGGCCAC GGTGGCGTCC TGCGTGGTGT GCGAGGCGGG CGCCATGAAG
CGCGCCGAAT ACCGCCGCTA CAACATCGCC GGCATCACCG GCGGCGACGA CTTCGCCGCC
ATGCGCCAGG CGCTCGAGCG CCGCTATGGC AAGGTCGCGG CCGGGGAGGG TGTGTGCCCC
GACCTGATCC TGATCGACGG CGGCAAGGGG CAGGTGAGCG CGGCGCGGGC GATCCTCGCC
GAGGTCGGCC TGGAGGCGGT GGCGATGGTG GGCGTGGCCA AGGGCGAGGG GCGCAAGGCG
GGTCTGGAGA CGCTGATCTT CCCCGACGGG CGCGAGGGTC TGGCGCTCGG CGGCGAGTCG
GCGGCGCTGC ACCTGATCGT CGAGATCCGC GACGAGGCTC ACCGCTTCGC CATCACCGGG
CACCGCGCCA AGCGCGCCAA GGCGCGGGTG GGCTCGAAGC TGGAGGACGT CCCCGGCGTC
GGCCCTTCGC GCCGTCGCAA CCTGCTCGCC GCCTTCGGCG GGCTGGACGG GGTGCGCGAG
GCGACGGTGG AGGACCTGTG CCGGGTGGAG GGCGTCAGCC GCAAGCTCGC GGAGCAGATC
CACGCTGCGC TGCGCTGA
|
|---|
| Protein sequence | MTDPTPAPAF DPKPFLRTLT EEPGVYRMIG ADDKVLYVGK AKNLKRRVSS YFQKTVSSPR
IAMMVAQVLR VDITATRSEA EALILENNLI KSLAPRYNIL FRDDKTYPYI ELSADEFPRL
AYHRGAFTKG ARYFGPFPNA WAVRESIHLL QKTFQLRTCE NTVFANRSRP CLLHQIKRCT
APCVSLVEPA AYAADVKLAT RFLDGQASEV IDDLTNRMQA AAERLAFEEA AACRDQVRVL
QAVLHKQFVD SRKDEDVDVL AAIEADGLTC VNIAMVRGGR HLGDRPQFPS GAAVSGAVDS
LLAFVEQHYS QHPIPARILV NLPPEAVKET LAEITERPPG VVSPRFEAEK AWMEMAEKNA
HLAIQARARD TGRIEQRLEA LREALGMDEA PQRIECFDIS HTMGEATVAS CVVCEAGAMK
RAEYRRYNIA GITGGDDFAA MRQALERRYG KVAAGEGVCP DLILIDGGKG QVSAARAILA
EVGLEAVAMV GVAKGEGRKA GLETLIFPDG REGLALGGES AALHLIVEIR DEAHRFAITG
HRAKRAKARV GSKLEDVPGV GPSRRRNLLA AFGGLDGVRE ATVEDLCRVE GVSRKLAEQI
HAALR
|
|---|
| |