Gene Tmz1t_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2240 
Symbol 
ID7083672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2523801 
End bp2524646 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID643699259 
Productphosphoserine phosphatase SerB 
Protein accessionYP_002355875 
Protein GI217970641 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR00338] phosphoserine phosphatase SerB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00113806 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCG TCGTGCTGGC CGAGGACGTC GACAGCGTCG CGCTCAAGAA CGTCGCCAAG 
GTGTCGGAGG CGAGCGCGAT CGAGCAGATC ACCACGCGCT CCTTCCGCCT CGTCGGCGCG
AAGCCGGTCG AAGGTCTGGT GGCCGCGTGC GCGGCCGGGG GGCTCGACCA CGTGTGGCTG
CCCGAGGGCC GCCAGCTGCG CGATTTCGGC CTCTTCGTGA CCGACATGGA CTCGACCCTG
ATCAACATCG AGTGCATCGA CGAGATCGCC GACATGCAGG GCTTCAAACG CGAGGTGGCG
GCGATCACGG AGGCGGCGAT GCAGGGCGAG ATCGACTTCC GCGAGTCGCT GACGCGTCGC
GTGGCCCTGC TCGCCGGCCT GCCCGAGAGC GCGCTCGCCG AGGTCTTCGA TCACCGCCTG
CAGCTCAACC CCGGGGCGGA GCGCCTGCTG CAGGGGTTGC AGCGCGCGGG TATCCGCACG
ATGCTGGTGT CGGGCGGCTT CACGTATTTC ACCGAGCGGC TGAAGTCGCG GCTGGGCTTC
GACTATGCGT GGGCGAACCA GCTCGAGGTG TATGACGGAA AGCTGACCGG AAAGGTGCTC
GGGGACATCG TGGACGGCGA GGCCAAGGCC GCGCACCTGG AGCAGGCGCG CGACGAGTTG
GGCCTCAGGC CCGAGCAGGT GATCGCCGCC GGCGACGGCG CCAACGACAT CCCCATGCTG
CGCGCGGCCG GCTTCGGTGT CGCCTTCCAC GCCAAGCCGG TGCTGCGCGA CGTCGCCCAC
TGCTGCCTCG ACCACACCGG CCTGGACGGC ATCCTCGACC TGTTCGGCCC TGGCGGCGAA
AGCTGA
 
Protein sequence
MNLVVLAEDV DSVALKNVAK VSEASAIEQI TTRSFRLVGA KPVEGLVAAC AAGGLDHVWL 
PEGRQLRDFG LFVTDMDSTL INIECIDEIA DMQGFKREVA AITEAAMQGE IDFRESLTRR
VALLAGLPES ALAEVFDHRL QLNPGAERLL QGLQRAGIRT MLVSGGFTYF TERLKSRLGF
DYAWANQLEV YDGKLTGKVL GDIVDGEAKA AHLEQARDEL GLRPEQVIAA GDGANDIPML
RAAGFGVAFH AKPVLRDVAH CCLDHTGLDG ILDLFGPGGE S