Gene Tmz1t_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2234 
Symbol 
ID7083666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2516835 
End bp2517728 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID643699254 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_002355870 
Protein GI217970636 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAG GCCGCCTTGG GCTTGAGACC GCACGCATCC CCCACGCTGA CCGGCACGGC 
CTGCTATGGC TCGAGCGCGG AGAGTTGTGT GTGGTCGACG GCTGTCTGCA CTTCATGGCG
GGAAAAGACA GCCTCACGCC CTACATCGAT CAGATCCCGC ATCAAGCAGT GTCGATGATC
CTGCTGGGAC CAGGCAGCAG CGTCACCCAC GACGCCCTGC GCCTGCTCGC CCGACATGGC
ACGCTGATGG CGGCGGTTGG CACGGATGGC GTACGCAGCT ACACCGCGCC AGCCCTGCTG
CCCGACCGCT CGGACGTCGC GCGCCGACAA GCGGAGCTGT GGGGCAATCC GCGCCGGCGC
ATTGCCGTCG CCCGCCGCAT GTACGCCCTG CGCCTGGGCG AAATATTGCC TCACCGTGAT
CTGGACACGC TGCGTGGCAT CGAAGGCTCG CGGGTGAAGA CGCTTTACCG GCTAACCGCC
GAGCGCTACC GCATTCCCTG GAACGGTCGC CATTACGACC GCGCTGCGCC CGAAGCGACC
GATACACCGA ATCAGGCAAT CAATCATGCG GCCACTGCTG TGCAGGCCGC GGCGGCGATC
GCAGTACAGT CGCTGGCTGC AATTCCGCAG CTTGGCTTCA TTCACGAGGA CTCGGGTCAG
TCCTTCGTTC TCGACATTGC CGATCTGTTT CGCGATTCGA TCACGTTGCC GATCGCATTT
GCCGCGGCAC GCAAGGCACT CGACGGTGCG CCAGACACTA TCGACCGATT GGTGCGACGC
GAGGCGGCAG CGGTTTTCAG GAAGCAGTCC GTGATTCCAA CAATGATCGA CAAGATCAAG
GCTGTGTTGC GCATGGAGGA AGTAGATGCC GCTGGTGGTG ATAGTGACGC GTGA
 
Protein sequence
MLKGRLGLET ARIPHADRHG LLWLERGELC VVDGCLHFMA GKDSLTPYID QIPHQAVSMI 
LLGPGSSVTH DALRLLARHG TLMAAVGTDG VRSYTAPALL PDRSDVARRQ AELWGNPRRR
IAVARRMYAL RLGEILPHRD LDTLRGIEGS RVKTLYRLTA ERYRIPWNGR HYDRAAPEAT
DTPNQAINHA ATAVQAAAAI AVQSLAAIPQ LGFIHEDSGQ SFVLDIADLF RDSITLPIAF
AAARKALDGA PDTIDRLVRR EAAAVFRKQS VIPTMIDKIK AVLRMEEVDA AGGDSDA