| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2214 |
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| Symbol | ispD |
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| ID | 7085567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2493531 |
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| End bp | 2494250 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643699234 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002355850 |
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| Protein GI | 217970616 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCCA TGCAGATCAG CCACCCACGC CACTTCGCCA TCGTGCCCGC CGCAGGCAGC
GGCTCGCGCA TGGCCGCCGC GCGTCCCAAG CAGTATCTGT CGCTGCTCGG TCGCCCCCTG
ATCCATCATG CGCTTTCGGT GCTGTGCGCC GCGCCTGCGA TCGACGCGGT GTTCGTCGTG
CTCTCGGTGG ACGACACGGA GTGGGCAACG CACGACTGGA GCGCGCTCGG CCCCAAGCTG
CGCCCGCTCT TCTGCGGTGG CGCCACGCGC GCCGACAGCG TGCTCGGCGG CCTGCGCGCA
ATCGCCGGCG AGGCGGCGGC TGGGGACTGG GTGCTGGTGC ACGACGCCGC GCGCCCCTGC
CTGGCGCCCT GGCATGTCGA CAAGCTCGTA CGCGAGCTCG CCCACGACGA GGTCGGCGGC
TTGCTGGCAG TCCCGGTGGC CGACACCCTC AAGCGTGCCG ACGAGCACCG CCATGTGTGC
GAGACCGTGC CGCGCGACAG CCTGTGGCAG GCGCAGACGC CGCAGATGTT CCGCTACGCC
ATGCTGCGAC GCGCGCTCGA AGGCGCGCGC GAGGTCACCG ACGAGGCGAG CGCGATCGAG
GCCGCCGGCC TGCGTCCGCG CCTGGTGCAG GGCGACGCCA CCAACCTGAA GGTCACCTAT
CCGCTCGACC TGCACCTGGC CGAGTGGATC CTCGAGAACC GTGAGGGCCA CAACGCATGA
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| Protein sequence | MRAMQISHPR HFAIVPAAGS GSRMAAARPK QYLSLLGRPL IHHALSVLCA APAIDAVFVV
LSVDDTEWAT HDWSALGPKL RPLFCGGATR ADSVLGGLRA IAGEAAAGDW VLVHDAARPC
LAPWHVDKLV RELAHDEVGG LLAVPVADTL KRADEHRHVC ETVPRDSLWQ AQTPQMFRYA
MLRRALEGAR EVTDEASAIE AAGLRPRLVQ GDATNLKVTY PLDLHLAEWI LENREGHNA
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