Gene Tmz1t_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2207 
Symbol 
ID7085560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2488709 
End bp2489191 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID643699227 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002355843 
Protein GI217970609 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.118334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTTA CGACCAAGGG ACGGTTTGCG GTGACCGCGA TGATCGACCT GGCTGCCCGC 
CAGGGGGACG GGCCCGTCAC GCTGGCGGGC ATCGCCGAGC GCCAGAGCAT CTCGCTGTCC
TACCTCGAGC AGCTCTTCGG CAAGCTGCGC AGGCACAAGC TGGTCAACAG CGTGCGCGGT
CCCGGCGGCG GCTACCGACT GGCGCGGGCG ATGGACGAGA TCACCGTGGC CGACATCATC
ATCGCGGTCG ACGAGCCGAT GGACGCCACC CAGTGCGGCG GCAAGGAAAA CTGCCACGAC
GATCACGTGT GCATGACCCA CCACCTGTGG TCCAACCTCA ACCAGCGCAT CTACGCCTAC
CTCGACTCGG TGAGCCTGGA GGCGCTGGTC AAGCACCAGG TACGGCCCGA CGCCGACATG
ACGGTGCTCA AGAGCGTGCG GCGGCGCAGC CGCATGCCGG TGCACGAGAT CGCCGCGGTC
TGA
 
Protein sequence
MRLTTKGRFA VTAMIDLAAR QGDGPVTLAG IAERQSISLS YLEQLFGKLR RHKLVNSVRG 
PGGGYRLARA MDEITVADII IAVDEPMDAT QCGGKENCHD DHVCMTHHLW SNLNQRIYAY
LDSVSLEALV KHQVRPDADM TVLKSVRRRS RMPVHEIAAV