Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2207 |
Symbol | |
ID | 7085560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 2488709 |
End bp | 2489191 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643699227 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_002355843 |
Protein GI | 217970609 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.118334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTTA CGACCAAGGG ACGGTTTGCG GTGACCGCGA TGATCGACCT GGCTGCCCGC CAGGGGGACG GGCCCGTCAC GCTGGCGGGC ATCGCCGAGC GCCAGAGCAT CTCGCTGTCC TACCTCGAGC AGCTCTTCGG CAAGCTGCGC AGGCACAAGC TGGTCAACAG CGTGCGCGGT CCCGGCGGCG GCTACCGACT GGCGCGGGCG ATGGACGAGA TCACCGTGGC CGACATCATC ATCGCGGTCG ACGAGCCGAT GGACGCCACC CAGTGCGGCG GCAAGGAAAA CTGCCACGAC GATCACGTGT GCATGACCCA CCACCTGTGG TCCAACCTCA ACCAGCGCAT CTACGCCTAC CTCGACTCGG TGAGCCTGGA GGCGCTGGTC AAGCACCAGG TACGGCCCGA CGCCGACATG ACGGTGCTCA AGAGCGTGCG GCGGCGCAGC CGCATGCCGG TGCACGAGAT CGCCGCGGTC TGA
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Protein sequence | MRLTTKGRFA VTAMIDLAAR QGDGPVTLAG IAERQSISLS YLEQLFGKLR RHKLVNSVRG PGGGYRLARA MDEITVADII IAVDEPMDAT QCGGKENCHD DHVCMTHHLW SNLNQRIYAY LDSVSLEALV KHQVRPDADM TVLKSVRRRS RMPVHEIAAV
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