| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2196 |
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| Symbol | |
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| ID | 7085549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2479687 |
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| End bp | 2480844 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643699216 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002355832 |
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| Protein GI | 217970598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACCA GCCCCTCCAG CTCCTCCACC CTCGCGCTCG CCTGCGAGCT CATCGCCCGC
CCCTCCGTCA CGCCGGAGGA CGCCGGCTGC CTCGAACTCG TCGCCTCCCG CCTTGCCCCG
CTCGGCTTCC GCCTCGAACG CATCGACAGC GGCGGCGTCT GCAACCTGTG GGCGCGGCGC
GGCATTGCGG CGCCCGTGCT GTGCTTCGCC GGCCACACCG ACGTCGTGCC GCCCGGGCCG
GACAGCGCGT GGTCCTCGCC GCCCTTCGCA CCTACGATCC GCGACGGCGT GCTGTACGGT
CGCGGTGCGG CCGACATGAA GTCCTCGCTT GCCGCCTTCG TCACCGCCAT CGAACGCTTC
GTCGCCGCCC ATCCCGACCA CGCTGGCAGC ATCGCGCTGC TGCTGACGTC GGACGAGGAA
GGCATCGCCA CCCATGGCAC GGTCAAGGTG GTCGAGGCCT TGGCCGCGCG CGGCGAGCGC
CTCGACTACT GCGTGGTGGG CGAGCCGACC TCGGTGCAGA CGCTCGGCGA CATGATCAAG
AACGGCCGCC GCGGCTCGCT GTCGGGTACG CTGCGGGTCA AGGGCCAGCA GGGCCACGTC
GCCTACCCGC AGCTCGCCCG CAACCCGATC CACCTTTTCG CGCCGGCGCT CGCCGAGCTC
GCGGCGAGCG ACTGGGACCA GGGCAACGAG TTCTTCCCGC CCACGACCTG GCAGGTGTCG
AACATCCACG CCGGCACCGG CGCCAACAAC GTGATCCCCG GTGTGTGCGA GGTGATGTTC
AATTTCCGCT TCGGCTCGGT GTCGAGCGCG GACGAGCTGA AAAGCCGCAC TTGCGAGGTG
CTCGACCGCC ACGGGCTGGA CTACGAGATC GACTGGCACC TGTCCGGCAA GCCCTTCATC
ACCGGGCGCG GCAGGCTGGT CGGCGCGCTG TCGGCCGCGA TCCGGGAGAC GCTGGGAGTC
GAGACAGAAC TGTCGACGAC CGGCGGCACC TCCGACGGCC GCTTCATCGC CGAGATCTGC
GCCGAGGTAG TCGAGTTCGG CCCGGTCAAT GCTTCGATCC ACAAGATCGA CGAGCACATC
GCAGCCGATG CGATCGAACC CTTGTCCGTG GTTTATGAGC GCACCTTGAC CGCCCTGCTC
GTCCCCGGCC GCCTGTAG
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| Protein sequence | MQTSPSSSST LALACELIAR PSVTPEDAGC LELVASRLAP LGFRLERIDS GGVCNLWARR
GIAAPVLCFA GHTDVVPPGP DSAWSSPPFA PTIRDGVLYG RGAADMKSSL AAFVTAIERF
VAAHPDHAGS IALLLTSDEE GIATHGTVKV VEALAARGER LDYCVVGEPT SVQTLGDMIK
NGRRGSLSGT LRVKGQQGHV AYPQLARNPI HLFAPALAEL AASDWDQGNE FFPPTTWQVS
NIHAGTGANN VIPGVCEVMF NFRFGSVSSA DELKSRTCEV LDRHGLDYEI DWHLSGKPFI
TGRGRLVGAL SAAIRETLGV ETELSTTGGT SDGRFIAEIC AEVVEFGPVN ASIHKIDEHI
AADAIEPLSV VYERTLTALL VPGRL
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