| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2194 |
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| Symbol | dapD |
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| ID | 7085547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2477595 |
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| End bp | 2478416 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643699214 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_002355830 |
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| Protein GI | 217970596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.532202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCTC TGCAATCGAT CATCGACACC GCCTTCGAGA ACCGCGCCAG CCTGTCGCCC
ACTTCCGCCC CGGCAGAGAT CCGCAACGCG GTCGAAGAGG TCATCGCCGG CCTGGATGCC
GGCACGCTGC GCGTGGCCGA GAAGAAGGAC GGTCAGTGGG TGGTCAACCA GTGGATCAAG
AAGGCCGTGC TGATCTCCTT CCGCCTGCGC GACAACGAGC TGGTGCAGGC CGGCGGCCTC
AACTTCTTCG ACAAGGTGGC GACCAAGTTC GGCGACTACA CCCCCGAGCA GTTCCGCGAG
GGTGGCTTCC GCGTGGTGCC GCCGGCGGTC GCCCGCAAAG GCAGCTTCAT CGGCCGGAAC
GTCGTGCTGA TGCCGTCCTA CGTGAACATC GGCGCCTATG TGGACGAAGG CACGATGGTC
GACACCTGGG CCACCGTCGG TTCGTGCGCG CAGATCGGCA AGAACGTGCA CCTGTCGGGC
GGCGTGGGCA TCGGCGGCGT GCTCGAGCCG GTGCAGGCCG GACCGGTGAT CATCGAGGAC
AACGTCTTCG TGGGCGCGCG CTCCGAGGTC GTGGAGGGCG TGATCATCGA GGAGAACGCG
GTGCTGTCGA TGGGCGTGTA CATCGGCATG AGCACCAAGA TCTACGACCG CGAGACCGGC
GAGATCACCT ACGGCCGCGT GCCGGCGGGC GCCGTCGTGG TGCCCGGCAG CCTGCCTTCG
GCCTGCGGCA AGTACAGCCT GTACTGCGCG GTGATCGTCA AGAAGGTGGA CGCGCAGACC
CGCGCCAAGA CCGGCATCAA CGAGCTGCTG CGCGGCGCCT GA
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| Protein sequence | MHALQSIIDT AFENRASLSP TSAPAEIRNA VEEVIAGLDA GTLRVAEKKD GQWVVNQWIK
KAVLISFRLR DNELVQAGGL NFFDKVATKF GDYTPEQFRE GGFRVVPPAV ARKGSFIGRN
VVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP VQAGPVIIED
NVFVGARSEV VEGVIIEENA VLSMGVYIGM STKIYDRETG EITYGRVPAG AVVVPGSLPS
ACGKYSLYCA VIVKKVDAQT RAKTGINELL RGA
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