Gene Tmz1t_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2144 
Symbol 
ID7085497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2420083 
End bp2421309 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content73% 
IMG OID643699164 
Productprotein of unknown function DUF214 
Protein accessionYP_002355780 
Protein GI217970546 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGTTCG TGCTCGCGGC GGCCATCCTG GCGCTGCCGG TGCTCGCGCG CCTCGTGCTG 
CCCTTGCTCG CGCGCGGGCG CAGCGCGATC TGGCGGCTGG CGCACGCGCG CCTGGCGGCG
GCGCCGGGGC AGGCGGTGGT GGCGGGGGCA GGGGTGATCG CCAGCGTCGC GCTCGCGGTG
TCGATGGCGA TCATGGTGAA TTCCTTCCGC GTCTCGGTGG ATGAGTGGCT CGCCCAGGTC
TTGCCGGCAG ACCTGTACGT GCGTGCCTCG GCGGCGAGTG GCAGCGGCTA CCTCGATCCG
CCTGCGCTCG TGGCGATCGC GGCCACGCCC GGCGTGGCGC GAGTAGAGAC GACGCGGCTC
GTGAACCTGC GCGTTTCGGA CACCGAGCCG CTGTTCAGCG TGCTGGCGCG CGCGACGCAG
GGCAACCGGG GGCTGCCGCT GGTGAGCGGA TCGATGGAGC CGGTGGCCGG GGACGCGGAA
GGCCTGCCTC CGGCCTGGGT GTCGGAGGCG GCTGCCGACC GCCACGATCT GGCGCGCGGC
AGCCGCTTCG AGCTGCCGCT GGGAGGCCGG ATGCAGGCCT TCCGCGTCGC CGGGGTGTGG
CGCGACTACG CCCGCCAGCA CGGCGCCGCG CTGATCGAGC GCCGCGACTA CGTCGCCCTC
ACCGGCGACG ACCGGGTAAA CGACGCCGCG CTACTGCTCG AGCCGGGTGC CACTCCGTCA
GCGGTGGCGC AGGCGCTGCG CGAGCGCTTC GGCGCCGAGC ACATCACCAT CGCGCTGCCG
GGCGAGATCC GCGCGCTCAG CCTGCAGATA TTCGATCGTA CCTTCCTGAT CACCTACCTG
ATGGAGGCGG TCGCGGTGGT GATCGGCCTG TTCGGCATCG CCACCACCTT CGCCGCGCTC
GCCGCCACCC GCCAGGGCGA GTTCGGCATG CTGCGCCATC TCGGCTTCAC GCGCGCCGAG
ATCGGTCGCC TGATCGCCAC CGAGGGCGCG CTGACCGCAG GGCTGGGCGT GATCGCCGGA
CTCGCCGGCG GCGCGGCGAT CGCCTGGGTG CTGATCGAGA TCATCAACCG GCAGAGCTTC
CACTGGAGCA TGGAGCTGGC CGTGCCGTGG AGCGGGCTGG CGATCTTCGC CGTCTGCCTG
GTGCTGCTGG CGGCGCTGGT GGCCCGGCTC GCCGGAAGGC ACGCGATGCG GCGGTCGGCG
GTGCTGGCGG TGAAGGCGGA TTGGTAG
 
Protein sequence
MVFVLAAAIL ALPVLARLVL PLLARGRSAI WRLAHARLAA APGQAVVAGA GVIASVALAV 
SMAIMVNSFR VSVDEWLAQV LPADLYVRAS AASGSGYLDP PALVAIAATP GVARVETTRL
VNLRVSDTEP LFSVLARATQ GNRGLPLVSG SMEPVAGDAE GLPPAWVSEA AADRHDLARG
SRFELPLGGR MQAFRVAGVW RDYARQHGAA LIERRDYVAL TGDDRVNDAA LLLEPGATPS
AVAQALRERF GAEHITIALP GEIRALSLQI FDRTFLITYL MEAVAVVIGL FGIATTFAAL
AATRQGEFGM LRHLGFTRAE IGRLIATEGA LTAGLGVIAG LAGGAAIAWV LIEIINRQSF
HWSMELAVPW SGLAIFAVCL VLLAALVARL AGRHAMRRSA VLAVKADW