Gene Tmz1t_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2008 
Symbol 
ID7083763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2270772 
End bp2273369 
Gene Length2598 bp 
Protein Length865 aa 
Translation table11 
GC content67% 
IMG OID643699033 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_002355655 
Protein GI217970421 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.244907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGAAG CCTACCGTGC CCATGTCGCC GAACGTGCCG CCCTCGGCAT CCCGCCGCTG 
CCGCTCTCCA AGCAGCAGGC CACCGAACTC GTCGAGTTGC TCAAGAACCC CCCCGCCGGC
GAGGAGGCCT TCCTCGTCGA GCTGCTCACC TACCGCGTCC CCGCCGGCGT GGATGACGCC
GCCAAGGTCA AGGCCGAGTT CCTGGCCAGG GTCGCCAAGG GCGAGGAAGC CTGTGCCCTG
GTGTCGCGCG CCAAGGCCAC CGAGCTGCTC GGCACCATGC TGGGCGGCTT CAACATCAAG
CCGATGATCG ATCTGCTGGC CGACGCCGAA GTGGGCGCGG TCGCCGCCGA GGGTCTCAAG
AAGACCCTGC TGATGTTCGA CTACTTCCAC GACGTCAAGG AGCTGGCCGA GAAGGGCAAC
GCCAACGCCA AAGCCGTGAT GCAGTCGTGG GCCGACGCCG AGTGGTTCAC CAGCCGCCCG
GAAGTCCCCG CCTCGCAAAA GCTCACCGTC TTCAAGGTCA CCGGCGAGAC CAACACCGAC
GACCTGTCGC CCGCACCCGA CGCCTGGTCG CGCCCCGACA TCCCGCTGCA CGCGCTGGCC
ATGCTCAAGA ACCCGCGTCC GGGCATCACC CCGGAAGAAG CCGGCGTGCG CGGCCCGGTC
AAGTTCCTCG AAGAGCTGCG TGCCAAGGGC AACCTGGTCG CCTACGTCGG TGACGTGGTC
GGCACCGGTT CCTCGCGCAA GTCCGCCACC AACTCGGTGC TGTGGTTCAC CGGCGAGGAC
ATCCCCTTCG TCCCGAACAA GCGTTTCGGC GGCGTGTGCC TCGGCTCCAA GATCGCCCCG
ATCTTCTTCA ACACCATGGA AGATGCCGGC GCGTTGCCGA TCGAGATCGA CGCCGGCCAG
ATGGACATGG GCGACGAGAT CGAGCTCAAG GTCGACCACG CTTCCGGCAA GGTCACCGCG
CTCAAGAACG GCGCCGTGAT CTCCGAATCG CAGCTCAAGA CCCTGGTCAT CCTCGACGAA
GTGCGCGCCG GTGGCCGCAT TCCGCTGATC ATCGGCCGCG GCCTCACCAC CAAGGCGCGC
GAGGCCCTCG GCCTGCCGCC CTCGACGCTG TTCCGCCTGC CGCAGGCCCC CGCCGATACC
GGCAAGGGCT TCTCGCTTGC GCAAAAGATG GTCGGCCGCG CCTGCGGCAT GCCGGAAGGC
CAGGGCATCC GCCCGGGTAC CTACTGCGAA CCCAAGATGA CCACCGTCGG CAGCCAGGAC
ACCACCGGCC CGATGACCCG CGACGAGCTC AAGGACCTCG CCTGCCTCGG CTTCTCCGCG
GACCTGGTGA TGCAGTCCTT CTGCCACACC GCCGCCTATC CGAAGCTGGT CGACGTCAAG
ATGCACCGCG AGCTGCCGAG CTTCATCAGC ACCCGCGGCG GCGTCGCGCT GCGCCCGGGC
GACGGCGTGA TCCACTCCTG GCTCAACCGC CTGCTGCTGC CCGACACCGT CGGCACCGGC
GGCGACAGCC ACACCCGCTT CCCGATCGGC ATCTCCTTCC CGGCCGGCTC GGGCCTGGTC
GCCTTCGCCG CAGCCACCGG CGTGATGCCG CTCGACATGC CGGAATCGGT GCTGGTGCGC
TTCAAGGGCA AGATGCAGCC GGGCGTCACC CTGCGCGACC TGGTCAACGC CATCCCGCTG
TACGCCATCC GCCAAGGCCT GCTGACCGTC GAGAAGAAGG GCAAGAAGAA CATCTTCTCC
GGCCGCATCC TCGAGATCGA AGGCCTGCCG GATCTCAAGG TCGAACAGGC CTTCGAGCTC
ACCGACGCCT CGGCCGAGCG CTCCGCCGCC GGCTGCACGG TCCACCTCAA CAAGGCGCCG
ATCGTCGAGT ACATGAACTC GAACATCACG CTGATGAAGT GGATGATCGC CAACGGCTAC
CAGGACGCCC GCACCCTCAA GCGCCGCATC AAGGCCATGG AAGACTGGAT CGCCAACGGC
ACGCTGCTGT CGGGCGACGC CGACGCCGAC TACGCCGCCG TGATCGAGAT CGACCTCGCC
GACATCAAGG AGCCGATCGT CGCCTGCCCG AACGACCCGG ACGACGTCAA GCTGCTGTCC
GAAGTCGCCG GCGACAAGAT CGACGAGGTC TTCATCGGCT CGTGCATGAC CAACATCGGC
CACTTCCGCG CCGCCGGCAA GGTGCTCGAC GGCAAGTCCG ACATCCCGAC CCGCCTGTGG
ATCGCCCCGC CCACCAAGAT GGACGCGATG ATCCTCAACG AGGAAGGCTA CTACGGCGTG
CTCGGCAAGT CCGGCGCCCG CATGGAGATG CCGGGCTGCT CGCTGTGCAT GGGCAACCAG
GCGCAGATCC GCAAGGGCAG CACCGCGATG TCGACCTCGA CGCGCAACTT CCCCAACCGC
CTCGGCATCG ACACCCGCGT CTATCTGGGC TCGGCCGAGC TGGCCGCGGT GTGCGCGCTG
ATGGGCAAGA TCCCGAGCGT TGCCGAGTAC ATGGCGCAGG TGGAGGTGGT GAACAAGAAG
GCCGCCGACA TCTACCGCTA CATGAACTTC GACCAGATCG AGGAATTCCG CTCGGTCGCG
GATACGGTGG AAGTCTGA
 
Protein sequence
MLEAYRAHVA ERAALGIPPL PLSKQQATEL VELLKNPPAG EEAFLVELLT YRVPAGVDDA 
AKVKAEFLAR VAKGEEACAL VSRAKATELL GTMLGGFNIK PMIDLLADAE VGAVAAEGLK
KTLLMFDYFH DVKELAEKGN ANAKAVMQSW ADAEWFTSRP EVPASQKLTV FKVTGETNTD
DLSPAPDAWS RPDIPLHALA MLKNPRPGIT PEEAGVRGPV KFLEELRAKG NLVAYVGDVV
GTGSSRKSAT NSVLWFTGED IPFVPNKRFG GVCLGSKIAP IFFNTMEDAG ALPIEIDAGQ
MDMGDEIELK VDHASGKVTA LKNGAVISES QLKTLVILDE VRAGGRIPLI IGRGLTTKAR
EALGLPPSTL FRLPQAPADT GKGFSLAQKM VGRACGMPEG QGIRPGTYCE PKMTTVGSQD
TTGPMTRDEL KDLACLGFSA DLVMQSFCHT AAYPKLVDVK MHRELPSFIS TRGGVALRPG
DGVIHSWLNR LLLPDTVGTG GDSHTRFPIG ISFPAGSGLV AFAAATGVMP LDMPESVLVR
FKGKMQPGVT LRDLVNAIPL YAIRQGLLTV EKKGKKNIFS GRILEIEGLP DLKVEQAFEL
TDASAERSAA GCTVHLNKAP IVEYMNSNIT LMKWMIANGY QDARTLKRRI KAMEDWIANG
TLLSGDADAD YAAVIEIDLA DIKEPIVACP NDPDDVKLLS EVAGDKIDEV FIGSCMTNIG
HFRAAGKVLD GKSDIPTRLW IAPPTKMDAM ILNEEGYYGV LGKSGARMEM PGCSLCMGNQ
AQIRKGSTAM STSTRNFPNR LGIDTRVYLG SAELAAVCAL MGKIPSVAEY MAQVEVVNKK
AADIYRYMNF DQIEEFRSVA DTVEV