Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1986 |
Symbol | |
ID | 7083741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2246115 |
End bp | 2247371 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643699011 |
Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
Protein accession | YP_002355633 |
Protein GI | 217970399 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.914701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATACG AAATCCTCGT CGGCCTGCGC TACACCCGCT CGCGCAAGCG CGCCCAGGGG CGCAACCGCT TCATCTCCTT CATCTCCCTG GTATCGATGT TCGGCATCGC GCTGGGCGTC GCGGCGCTGA TCGTGGTGCT TTCGGTGATG AACGGCTTCC AGGAGGAGTT GCGCACCCGC ATCCTCGGTG TCGCCTCGCA CGTGCAGGTG CAGAGCCCGG AGGGCGGGCT CATGGCCTGG CAGCAGGTCG CCGACGAGTC GCTGCGCAAC CCCTCGGTGC GCGCCGCGGC GCCCTACGTG CAGGAGCAGG GCATGCTCTC CTTCGACGAG GGCGTGCGCG GAACGCTGGT GCGCGGGGTG ATCCCGTCCG CGGAGGAAAA GGTCGCCGAT TTCGGCCGCT ACATGCAGGC CGGCAGCTTC GATGCACTGC AGGCGGGCCG CTTCGGCATC GTGCTCGGAC GCGACCTCGC CGCCGCGCTG CGCGTGCGCC TGGGCGAGAA GGTCACGCTG ATCGCGCCGC AGGGCCTGGT GACGCCGGCG GCGGTGCTGC CGCGCGTCAA GCAGTTCGAG GTGGTGGGCA TCTTCGAGGC CGGCATGTAC GAGTACGACT CCAGCCTCGC GCTCGTGCAC ATCGCCGACG CCCAGGCGCT GTACCGGCTG GGCGACGCGG TGAGCGGCGT GCGCCTGAAG CTCGACGACC TCTTCGCAGC GCCGCGGGTG GCGCGCGAGC TGGCGATGAC GATCAGCGAG CCGGGTTTGG TCGTCGCCGA CTGGACGCGC AGCCACGCCA ACTTCTTCCG CGCGGTCGCG CTCGAGAAGA CCATGATGAC GCTGATCCTC TTCCTGATCG TGGCGGTCGC GGCCTTCAAC ATCGTCTCCA CGCTGGTGAT GGCGGTGCAG GAGAAGTACG CCGACATCGC CATCCTGCGC ACGCTGGGCG CGAGCCCGGT CTCGATCATG GCGATCTTCG TGCTGCAGGG CTCGGTGATC GGCCTGGTGG GCCTGGCCGC GGGCGTGGCC GGCGGGCTGG CGATCGCGCA CAACCTCGAC GTGGTGATCC CCGCGCTCGA GACGCTCACC GGGGCGACGC TGTGGAACAA GGAAATCTAT TACATCAACG AGCTGCCTTC GAAGGTCCTG GGCTCGGACG TGAGCACCAT CGTCACCGTT TCCTTCGTGC TGACCCTGGT GGCCGCGCTC TACCCGAGCT GGCGCGCCTC GAAGGTGAAT CCTGCGGAGG CGCTGCGCTA TGAATGA
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Protein sequence | MPYEILVGLR YTRSRKRAQG RNRFISFISL VSMFGIALGV AALIVVLSVM NGFQEELRTR ILGVASHVQV QSPEGGLMAW QQVADESLRN PSVRAAAPYV QEQGMLSFDE GVRGTLVRGV IPSAEEKVAD FGRYMQAGSF DALQAGRFGI VLGRDLAAAL RVRLGEKVTL IAPQGLVTPA AVLPRVKQFE VVGIFEAGMY EYDSSLALVH IADAQALYRL GDAVSGVRLK LDDLFAAPRV ARELAMTISE PGLVVADWTR SHANFFRAVA LEKTMMTLIL FLIVAVAAFN IVSTLVMAVQ EKYADIAILR TLGASPVSIM AIFVLQGSVI GLVGLAAGVA GGLAIAHNLD VVIPALETLT GATLWNKEIY YINELPSKVL GSDVSTIVTV SFVLTLVAAL YPSWRASKVN PAEALRYE
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