Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1981 |
Symbol | |
ID | 7083736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2235117 |
End bp | 2238845 |
Gene Length | 3729 bp |
Protein Length | 1242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643699006 |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_002355628 |
Protein GI | 217970394 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGGAA CGCTGACCAA CTCGGGTAAT GTCCGCGCCG AGTCCCGGGC GGATAGTGCC GGAGGTTCGT CGTATTCCTT CACCGACTCC GAGAGCGTCC GCATCCGTGG ATCGCTCAAC GGGGCGCTCG CCAATAGTGG TGCCATCGAG GCCCATGCCC AGAGCGCTGA AGGCAGCAGC AACTACAACG ACTACGTCCG CGCCTACGGG GTTTCCATCG GAGAGGATCT CACCGGCTCG CTCGAGAACA CGGGCACGAT TCATGCGACG GCGACGCGCT CGTCCGAGGG TGGCTATTCC TCCTACTCGG ATTACATGTG GGCCGTCGGC GTGCATGTCG GCGATGATCT GACCGGAGAG TTGCTCAACT CGGGCGAGAT CCTGGCCCGG ACCGAGGTCA GCGGCGGCGA CCAGTACGGC TACGCGAATG CCTACGGTGT GCGAGCCTAC GGATCGATGA GCGGGACGAT CGACAATGCC GGGACGATCC GCGCGGAATC CGTCCGGACC GCGGGCGAAG GCGGCTCTTC GACCTACACG AAGGCCTATG GCGTCGTCAC CGGCGATCTG GTTGGCAAGC TCGCCAACAG CGGCAGCATC GGCGCCCGCA GCGAGGCCGA GGAGGGCTAT GCACACGCCT ACGGTGTTTC GACCTATTCC GGCGACCTGA TCGGCACGAT CCAGAACGAC GGCGAGATCG CTGCCGAAGC CGTGAGCAAG GATGGCTACG CCGGCGCCTA CGGGGTCGGC GTCGGCTACA ACGTCTCCGG GACGCTGCAG AACAACGGTG AAATCTCGGC GCGCGCCGAG GCATCGACCG CACGTTCGCG TGGCGTATCG ATCCGCTACG GCGATCTGAG CGGCACGATC GGCAACGACG GCACGATCGA TGCCACTTCG ATCACGCAGG ATGGTTACGC AAACGCGGTG GGGGTCGGTT TCGGCACGGG TGAGGATTAC GACGGCGAAG ACTCTTACGG CAAGGTCTCG GGCACCTTGC GCAACGCGGG CACGGTGACA GCCACGGCTC TCGCGCAAGG CCGTGATTAC GAGGCGGGGT ACAGCCTGCT CGCGATGGAA GAGGAGCCGG CGCCTTCGAC GAGCGTCGCG GTGCGCGCAG GTGGCACGTA TGCCATCGGT GTGGGTACCG GGCTGGTGTC CTCGCAAGGG CGTATCGAGA ACAGCGGCAC GGTTGTTGCC GAGGCGCGCT CGGAAGCCGT CGCCGAGGCC GAGGATGAGG CCTACGCAGG GGCGTACGGC GCCGACGCCG CAGGTATCGG GAGCGCTGTG GTCGATGGCA AGGTCTCGAA CACCGGGTCG GTGTCGGCCA GCGCCATCGT GTCTGCCTCG GCAACCGGTG ATGCTGCGGC AGCGATGGCC AGTGAAGCAT GGACCTCGGG TGTCAGCTTC GGCGGTGCCG GCGGGGACTT CGACAACGGC GGCAGCATCG TTTCGCGCGC GACGGTCACG GCCCTGGCGA ATGGCGGCGC GAGCGCCAGC GCATATGCCG GAGGCGCCGA GGCGGCTGGC GTCGAGATCT GGGTTTCGGA TCCGGGCGTC TACACCGGCA ACTTCACCAA CTCCGGAACC ATCCAGGCAG AAGCCACCCT CTCGGCCGTC GCCACGGGCG AGGAGGCCGA GGCTCGATCC TACGACGGGG CGTCCGCATA CGGCGTCGTG GTGGACGGCT TCGACGGTCG CTTCACGAAC ACGGGCACCA TTCATGCATC CGCTTCCGCG ACGGTCACCG CCAACGGCGA GAACGTCGAG GAGGCCGCAG GTGCAGGCGC GGTTGGTGTA TTGGTCGTCC ATGGCATCGG CGCCGACGGC GTGCTCGACA ACCGTGGCAC GATCAGCGCA GTTGCCGAGG CTGCCGCTAC GGGCATGAGT GGCGTCGCAG GCGTCTTGAT CGGCGCCGAC GAGATCATGA GCGAGCCCAC CCTGGCCGTG ATGGTCGGCG AGGACGTCCC GGAGGATGGT TTCTACGGCA CCTTGAACAA CTCCGGAACC ATCACCGCAG AAGGTCGTGG CGGCATCGAG TCGGCGGGGG TGTTTTCCGT CATCGCCTCG GGTGGCACCG GAACGGTCAA TAACCTTCAG GGTGGCTTGA TGTCGGGCCG CTTGTTCCTC GGTGGCGAGG TCGCCATGAA CAACGCGGGA ACGCTCGACA TCCGCGACAG CGGTCGGTTG CTGAGTGATC AGTCCGAGGA GTCTGCCGAG GGCGAAGTCG AAATGGCTGC GATGGCCGCA TCGCCCCTGG AACGCGGCGG TAGCCACGTG GGTGGCAACT TCACCCAGAG TGCGACCGGT GTGCTGAAGA TCGACGTCGT GCCGGTCCGC GACGAGGCGG GCGCTGTCGT TGACAACGCT TATGGTGCGT TACATGTCGG TGGCACGGCC CAACTCGCCG ATGGCACCGG CGTCCGCGTC ATGGTCGACC CGGCCAGCAC GCTCGCCAGC GGGGATGTGC TGCAGGACGT GGTGTATGCC GAGGGTGGCA TCACTCGGGG TGCGGTGAAG GTGACGGACA ACGTCCTGCC GCTGAATTTC ATGGCGACTT CGGACGCATC GCCCAACGAC CTCGATCTCT CCGTCGTGGG TACCGGCCTC ACCACGATCT CCAACGCGGT GAATACGGCC GGCTTGAGTT CGGCCACGGG AGTCGCCGGT GTGCTCGACG GCCTGCTCGG ATCGGCCGAC TCGCAGCCGG GAGCCCTGGG TGACTTCCTC TTCGATGTGG CCGGTTCGGG CAATGCCCGC GAGGTCGCGG ACAAGGTCGC CACGCTGCTT CCGCTCGCCA GCGGTGGCGT CACCACGGCG ACGCTCGGTG CGCTGCACGG GGCGAATCGC GTGGTGCAGG CGCGGGTCGA CAGCAACCTC GGGCGTTCGT CCGGCGACGG CTTCCTCGGC GACAAGCGCA TGTGGCTGAA GGGCTTCGGC AGCTGGGCGG AGCAGGACGC GCGCAGCGGC GCTTCCGGCT ACGATGCGGA CACCGCCGGC CTCGCAGTCG GTGTGGATGC GATCGTGACC GATACCAACC GGGTCGGCGT GCTGTTCGCA TATTCCGAGA CCGACGTCGA CAGCACCGGC GCGGCCAAGC AGTCCGCCGA TGTCGACACC TACCAGCTCG GGCTGTACGG CAGCCACACG CTGGATGAAC GCACCGACAT CAACGGCATG ATCGGCTTCG GTCGTCACAG CACCGACGGC ACGCGCCATA CGACGGGCGG CGTGGCCGCC TCCAGCTACG ACAGCAGCAG CATCGTGGCT GGGGTCGGGA TCGCGCGTAC CTACCCGATG AGCGAGAAGA CCACGCTCAC GCCGTCGGTC CGCCTCGACT ACGCCCGGAT CAAGGATGAC GCCTATCAGG AGCAGGGCGC GGGCGCGCTC GACCTCAGCG TGGGCAAGAA CACCGTCAGC GAGCTGATCC TGTCGCTCGA CGGCAAGATC ACGCACGAGC TGTCGGACAC GCTGACCTTC GTCGGTCATG CGGGGGTGGG TTACGACTTC GAGAACGAGC AGTCCTCGAT CACCTCCACG CTCGCCGGCG CGCCGGGGGC TTCCTTCGTG ACCCGCGGTG TCGATCCGAG CCCGTGGCTG GTGCGCGCGG GCCTGGGGCT GGTCAATACG CCGATCGAGT CCTGGGAGTT CTCGGCCCGC TACGAGGTCG AGGGCCGCAG CGACTTCCTC AACCACACCG CGTGGCTGAG GGCGCGCAAG GCCTTCTGA
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Protein sequence | MDGTLTNSGN VRAESRADSA GGSSYSFTDS ESVRIRGSLN GALANSGAIE AHAQSAEGSS NYNDYVRAYG VSIGEDLTGS LENTGTIHAT ATRSSEGGYS SYSDYMWAVG VHVGDDLTGE LLNSGEILAR TEVSGGDQYG YANAYGVRAY GSMSGTIDNA GTIRAESVRT AGEGGSSTYT KAYGVVTGDL VGKLANSGSI GARSEAEEGY AHAYGVSTYS GDLIGTIQND GEIAAEAVSK DGYAGAYGVG VGYNVSGTLQ NNGEISARAE ASTARSRGVS IRYGDLSGTI GNDGTIDATS ITQDGYANAV GVGFGTGEDY DGEDSYGKVS GTLRNAGTVT ATALAQGRDY EAGYSLLAME EEPAPSTSVA VRAGGTYAIG VGTGLVSSQG RIENSGTVVA EARSEAVAEA EDEAYAGAYG ADAAGIGSAV VDGKVSNTGS VSASAIVSAS ATGDAAAAMA SEAWTSGVSF GGAGGDFDNG GSIVSRATVT ALANGGASAS AYAGGAEAAG VEIWVSDPGV YTGNFTNSGT IQAEATLSAV ATGEEAEARS YDGASAYGVV VDGFDGRFTN TGTIHASASA TVTANGENVE EAAGAGAVGV LVVHGIGADG VLDNRGTISA VAEAAATGMS GVAGVLIGAD EIMSEPTLAV MVGEDVPEDG FYGTLNNSGT ITAEGRGGIE SAGVFSVIAS GGTGTVNNLQ GGLMSGRLFL GGEVAMNNAG TLDIRDSGRL LSDQSEESAE GEVEMAAMAA SPLERGGSHV GGNFTQSATG VLKIDVVPVR DEAGAVVDNA YGALHVGGTA QLADGTGVRV MVDPASTLAS GDVLQDVVYA EGGITRGAVK VTDNVLPLNF MATSDASPND LDLSVVGTGL TTISNAVNTA GLSSATGVAG VLDGLLGSAD SQPGALGDFL FDVAGSGNAR EVADKVATLL PLASGGVTTA TLGALHGANR VVQARVDSNL GRSSGDGFLG DKRMWLKGFG SWAEQDARSG ASGYDADTAG LAVGVDAIVT DTNRVGVLFA YSETDVDSTG AAKQSADVDT YQLGLYGSHT LDERTDINGM IGFGRHSTDG TRHTTGGVAA SSYDSSSIVA GVGIARTYPM SEKTTLTPSV RLDYARIKDD AYQEQGAGAL DLSVGKNTVS ELILSLDGKI THELSDTLTF VGHAGVGYDF ENEQSSITST LAGAPGASFV TRGVDPSPWL VRAGLGLVNT PIESWEFSAR YEVEGRSDFL NHTAWLRARK AF
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