Gene Tmz1t_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1981 
Symbol 
ID7083736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2235117 
End bp2238845 
Gene Length3729 bp 
Protein Length1242 aa 
Translation table11 
GC content67% 
IMG OID643699006 
Productouter membrane autotransporter barrel domain protein 
Protein accessionYP_002355628 
Protein GI217970394 
COG category[S] Function unknown 
COG ID[COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain 
TIGRFAM ID[TIGR01414] outer membrane autotransporter barrel domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGGAA CGCTGACCAA CTCGGGTAAT GTCCGCGCCG AGTCCCGGGC GGATAGTGCC 
GGAGGTTCGT CGTATTCCTT CACCGACTCC GAGAGCGTCC GCATCCGTGG ATCGCTCAAC
GGGGCGCTCG CCAATAGTGG TGCCATCGAG GCCCATGCCC AGAGCGCTGA AGGCAGCAGC
AACTACAACG ACTACGTCCG CGCCTACGGG GTTTCCATCG GAGAGGATCT CACCGGCTCG
CTCGAGAACA CGGGCACGAT TCATGCGACG GCGACGCGCT CGTCCGAGGG TGGCTATTCC
TCCTACTCGG ATTACATGTG GGCCGTCGGC GTGCATGTCG GCGATGATCT GACCGGAGAG
TTGCTCAACT CGGGCGAGAT CCTGGCCCGG ACCGAGGTCA GCGGCGGCGA CCAGTACGGC
TACGCGAATG CCTACGGTGT GCGAGCCTAC GGATCGATGA GCGGGACGAT CGACAATGCC
GGGACGATCC GCGCGGAATC CGTCCGGACC GCGGGCGAAG GCGGCTCTTC GACCTACACG
AAGGCCTATG GCGTCGTCAC CGGCGATCTG GTTGGCAAGC TCGCCAACAG CGGCAGCATC
GGCGCCCGCA GCGAGGCCGA GGAGGGCTAT GCACACGCCT ACGGTGTTTC GACCTATTCC
GGCGACCTGA TCGGCACGAT CCAGAACGAC GGCGAGATCG CTGCCGAAGC CGTGAGCAAG
GATGGCTACG CCGGCGCCTA CGGGGTCGGC GTCGGCTACA ACGTCTCCGG GACGCTGCAG
AACAACGGTG AAATCTCGGC GCGCGCCGAG GCATCGACCG CACGTTCGCG TGGCGTATCG
ATCCGCTACG GCGATCTGAG CGGCACGATC GGCAACGACG GCACGATCGA TGCCACTTCG
ATCACGCAGG ATGGTTACGC AAACGCGGTG GGGGTCGGTT TCGGCACGGG TGAGGATTAC
GACGGCGAAG ACTCTTACGG CAAGGTCTCG GGCACCTTGC GCAACGCGGG CACGGTGACA
GCCACGGCTC TCGCGCAAGG CCGTGATTAC GAGGCGGGGT ACAGCCTGCT CGCGATGGAA
GAGGAGCCGG CGCCTTCGAC GAGCGTCGCG GTGCGCGCAG GTGGCACGTA TGCCATCGGT
GTGGGTACCG GGCTGGTGTC CTCGCAAGGG CGTATCGAGA ACAGCGGCAC GGTTGTTGCC
GAGGCGCGCT CGGAAGCCGT CGCCGAGGCC GAGGATGAGG CCTACGCAGG GGCGTACGGC
GCCGACGCCG CAGGTATCGG GAGCGCTGTG GTCGATGGCA AGGTCTCGAA CACCGGGTCG
GTGTCGGCCA GCGCCATCGT GTCTGCCTCG GCAACCGGTG ATGCTGCGGC AGCGATGGCC
AGTGAAGCAT GGACCTCGGG TGTCAGCTTC GGCGGTGCCG GCGGGGACTT CGACAACGGC
GGCAGCATCG TTTCGCGCGC GACGGTCACG GCCCTGGCGA ATGGCGGCGC GAGCGCCAGC
GCATATGCCG GAGGCGCCGA GGCGGCTGGC GTCGAGATCT GGGTTTCGGA TCCGGGCGTC
TACACCGGCA ACTTCACCAA CTCCGGAACC ATCCAGGCAG AAGCCACCCT CTCGGCCGTC
GCCACGGGCG AGGAGGCCGA GGCTCGATCC TACGACGGGG CGTCCGCATA CGGCGTCGTG
GTGGACGGCT TCGACGGTCG CTTCACGAAC ACGGGCACCA TTCATGCATC CGCTTCCGCG
ACGGTCACCG CCAACGGCGA GAACGTCGAG GAGGCCGCAG GTGCAGGCGC GGTTGGTGTA
TTGGTCGTCC ATGGCATCGG CGCCGACGGC GTGCTCGACA ACCGTGGCAC GATCAGCGCA
GTTGCCGAGG CTGCCGCTAC GGGCATGAGT GGCGTCGCAG GCGTCTTGAT CGGCGCCGAC
GAGATCATGA GCGAGCCCAC CCTGGCCGTG ATGGTCGGCG AGGACGTCCC GGAGGATGGT
TTCTACGGCA CCTTGAACAA CTCCGGAACC ATCACCGCAG AAGGTCGTGG CGGCATCGAG
TCGGCGGGGG TGTTTTCCGT CATCGCCTCG GGTGGCACCG GAACGGTCAA TAACCTTCAG
GGTGGCTTGA TGTCGGGCCG CTTGTTCCTC GGTGGCGAGG TCGCCATGAA CAACGCGGGA
ACGCTCGACA TCCGCGACAG CGGTCGGTTG CTGAGTGATC AGTCCGAGGA GTCTGCCGAG
GGCGAAGTCG AAATGGCTGC GATGGCCGCA TCGCCCCTGG AACGCGGCGG TAGCCACGTG
GGTGGCAACT TCACCCAGAG TGCGACCGGT GTGCTGAAGA TCGACGTCGT GCCGGTCCGC
GACGAGGCGG GCGCTGTCGT TGACAACGCT TATGGTGCGT TACATGTCGG TGGCACGGCC
CAACTCGCCG ATGGCACCGG CGTCCGCGTC ATGGTCGACC CGGCCAGCAC GCTCGCCAGC
GGGGATGTGC TGCAGGACGT GGTGTATGCC GAGGGTGGCA TCACTCGGGG TGCGGTGAAG
GTGACGGACA ACGTCCTGCC GCTGAATTTC ATGGCGACTT CGGACGCATC GCCCAACGAC
CTCGATCTCT CCGTCGTGGG TACCGGCCTC ACCACGATCT CCAACGCGGT GAATACGGCC
GGCTTGAGTT CGGCCACGGG AGTCGCCGGT GTGCTCGACG GCCTGCTCGG ATCGGCCGAC
TCGCAGCCGG GAGCCCTGGG TGACTTCCTC TTCGATGTGG CCGGTTCGGG CAATGCCCGC
GAGGTCGCGG ACAAGGTCGC CACGCTGCTT CCGCTCGCCA GCGGTGGCGT CACCACGGCG
ACGCTCGGTG CGCTGCACGG GGCGAATCGC GTGGTGCAGG CGCGGGTCGA CAGCAACCTC
GGGCGTTCGT CCGGCGACGG CTTCCTCGGC GACAAGCGCA TGTGGCTGAA GGGCTTCGGC
AGCTGGGCGG AGCAGGACGC GCGCAGCGGC GCTTCCGGCT ACGATGCGGA CACCGCCGGC
CTCGCAGTCG GTGTGGATGC GATCGTGACC GATACCAACC GGGTCGGCGT GCTGTTCGCA
TATTCCGAGA CCGACGTCGA CAGCACCGGC GCGGCCAAGC AGTCCGCCGA TGTCGACACC
TACCAGCTCG GGCTGTACGG CAGCCACACG CTGGATGAAC GCACCGACAT CAACGGCATG
ATCGGCTTCG GTCGTCACAG CACCGACGGC ACGCGCCATA CGACGGGCGG CGTGGCCGCC
TCCAGCTACG ACAGCAGCAG CATCGTGGCT GGGGTCGGGA TCGCGCGTAC CTACCCGATG
AGCGAGAAGA CCACGCTCAC GCCGTCGGTC CGCCTCGACT ACGCCCGGAT CAAGGATGAC
GCCTATCAGG AGCAGGGCGC GGGCGCGCTC GACCTCAGCG TGGGCAAGAA CACCGTCAGC
GAGCTGATCC TGTCGCTCGA CGGCAAGATC ACGCACGAGC TGTCGGACAC GCTGACCTTC
GTCGGTCATG CGGGGGTGGG TTACGACTTC GAGAACGAGC AGTCCTCGAT CACCTCCACG
CTCGCCGGCG CGCCGGGGGC TTCCTTCGTG ACCCGCGGTG TCGATCCGAG CCCGTGGCTG
GTGCGCGCGG GCCTGGGGCT GGTCAATACG CCGATCGAGT CCTGGGAGTT CTCGGCCCGC
TACGAGGTCG AGGGCCGCAG CGACTTCCTC AACCACACCG CGTGGCTGAG GGCGCGCAAG
GCCTTCTGA
 
Protein sequence
MDGTLTNSGN VRAESRADSA GGSSYSFTDS ESVRIRGSLN GALANSGAIE AHAQSAEGSS 
NYNDYVRAYG VSIGEDLTGS LENTGTIHAT ATRSSEGGYS SYSDYMWAVG VHVGDDLTGE
LLNSGEILAR TEVSGGDQYG YANAYGVRAY GSMSGTIDNA GTIRAESVRT AGEGGSSTYT
KAYGVVTGDL VGKLANSGSI GARSEAEEGY AHAYGVSTYS GDLIGTIQND GEIAAEAVSK
DGYAGAYGVG VGYNVSGTLQ NNGEISARAE ASTARSRGVS IRYGDLSGTI GNDGTIDATS
ITQDGYANAV GVGFGTGEDY DGEDSYGKVS GTLRNAGTVT ATALAQGRDY EAGYSLLAME
EEPAPSTSVA VRAGGTYAIG VGTGLVSSQG RIENSGTVVA EARSEAVAEA EDEAYAGAYG
ADAAGIGSAV VDGKVSNTGS VSASAIVSAS ATGDAAAAMA SEAWTSGVSF GGAGGDFDNG
GSIVSRATVT ALANGGASAS AYAGGAEAAG VEIWVSDPGV YTGNFTNSGT IQAEATLSAV
ATGEEAEARS YDGASAYGVV VDGFDGRFTN TGTIHASASA TVTANGENVE EAAGAGAVGV
LVVHGIGADG VLDNRGTISA VAEAAATGMS GVAGVLIGAD EIMSEPTLAV MVGEDVPEDG
FYGTLNNSGT ITAEGRGGIE SAGVFSVIAS GGTGTVNNLQ GGLMSGRLFL GGEVAMNNAG
TLDIRDSGRL LSDQSEESAE GEVEMAAMAA SPLERGGSHV GGNFTQSATG VLKIDVVPVR
DEAGAVVDNA YGALHVGGTA QLADGTGVRV MVDPASTLAS GDVLQDVVYA EGGITRGAVK
VTDNVLPLNF MATSDASPND LDLSVVGTGL TTISNAVNTA GLSSATGVAG VLDGLLGSAD
SQPGALGDFL FDVAGSGNAR EVADKVATLL PLASGGVTTA TLGALHGANR VVQARVDSNL
GRSSGDGFLG DKRMWLKGFG SWAEQDARSG ASGYDADTAG LAVGVDAIVT DTNRVGVLFA
YSETDVDSTG AAKQSADVDT YQLGLYGSHT LDERTDINGM IGFGRHSTDG TRHTTGGVAA
SSYDSSSIVA GVGIARTYPM SEKTTLTPSV RLDYARIKDD AYQEQGAGAL DLSVGKNTVS
ELILSLDGKI THELSDTLTF VGHAGVGYDF ENEQSSITST LAGAPGASFV TRGVDPSPWL
VRAGLGLVNT PIESWEFSAR YEVEGRSDFL NHTAWLRARK AF