| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1972 |
|---|
| Symbol | |
|---|
| ID | 7084440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2226093 |
|---|
| End bp | 2227877 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643698997 |
|---|
| Product | Cyanophycin synthase (L-arginine-adding) |
|---|
| Protein accession | YP_002355619 |
|---|
| Protein GI | 217970385 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0840229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAAT TGGTTCGGGT GGGCACCCGC TTCACATGGC TGCGCGGAGC CGCCTTCGGT
TTGCAACAGG GCGCACTCGC CGGAGAACTC GTGTTGACGG ACGAGGGGCG TGCCGGCATC
GTCGAGGAGA TGCTGGCGGC GTTCGCCGAC GAAGCGTCGA CAGGCGGGGA GCGGGCGGCG
GGCGCCTCGG GCGTCGAGTG CCTGATCGAC TGCATCCTTC GCTGCGTCGG CGCGTTGCAG
CGACGAGCGG GAGTCCCGGT GTCGTGGAGA AGCCATCGTG CCCTGATCCG GACCGTGGCG
GATGTGCGCG TCTTCAGGGT CGCGCTGCCG TCGGACCAGC CTGCGGCGAC CGAGCGTGCG
TTGCGTTGGG TGGTGGCCGA GGTGAATCGA CGCGCGACCG GCGGGCAGGC CGGGAGCAAG
GACGGGCGCA GCTCGCAGGA ATCGCTGGAA GAGCTGGATC GCATGCTCGG CGCGCATGCG
ATCCCCGGCA TCAACCCGAT CAACATCGCA CTTGCCGCTT ACCGCGCCGG GATCCCTGTG
GGGCGCCTCC TGCATGATGT ACTGGTGCTC GGTCAGGGGC GGAAGGCGCG CTGGATGAGG
AGCACGATCA CCGACCGGAC GTCCGGCATC GGCCTCGGGA TCGCCCGCAA CAAGGTGCAT
ACCGCGGAAG TTCTCCGTGC CGCGGGCCTC CCGGTGCCGC AGCAGGTGGT CGTGCGCTCG
CCGGAAGGCG CGGTCGAGGC CGCCCGTGCG CTGGGCTACC CCGTAGTGGT CAAGCCTGCG
GACCAGGAGC AGGGGGCGGG GGTGCAGGCC GGGCTGTCCG ACGATGCGAT GGTCCGCATC
GCGTATGACG CGGCCAGCGC CCTGTCGCGG ACGATCCTCG TCGAGCGCCA TGTCGAGGGC
TACACGCACC GCCTGACCGT CTTCCAGGGC AGGGTGGTCC GCGTGATGCG CAGGGTGGCG
GGGGGCGTGG TGGGCGATGG CGTGTCCGCT GTGGCCACTC TCGTGGAGCG GCGCCTGGAG
GACGAGATCC ACAGGCGGCG CGCGCAGCGC GCGGGGGCTC CCCTGCTGAG CCTGGACGCG
GAGGCGCTCG ATCTGCTGGC GCGCCGAGGC ATGGGGCCCG CATCGGTGCC CGCAGCCGGC
GAGTACATTC GCTTGCGGCG GCGCGACAAC ATCAATGCCG GTGGGGAAAA CCGCCCCTGT
GCGCTCGGCG ACGTCCATCC GGCGAATCTG CAGCTCGCGG TGGACGCCGC GATGGCATTG
CGGCTGGATC TGGCCGGCGT GGATCTGATC ATCGAGGATG TCTCCAGATC CTGGCTGGAG
GCGGGCGGGG CGATCTGCGA GGTCAACGGC CAACCGCAGA TGGGGGGCAA TTCCCACGCG
GGCGTGCTCG ATGCGGTGGT GCGCGAGCTC GTCGGGGGCG ACGGACGCAT CCCGGTCCAC
CTCGTCGTCT GTCCGGACCG CGAGGATTGG CACGCGGGCC TTTCGGCGCG GCTGCTGCAG
CACGGCGAGG TCGATGGCGT GTCGTCGCGT CATGGCCTCG TCCTGCGCGG AGCTCGGGTC
AGCATGCCGT TCGAGGACGC GCTGGCGGCG GCGCAGGCCC TGTTGTGCCG GGCCGATGTC
GGCTCCGCGG CGTGCCTGAT GTCGGCGCCC GACATCCTGC GACTGGGTCT CCCGAGCGAC
GTGCTCGACA GCCTTCGGGT CGCCGACGAG ACGGCGATGA GCGCGGCCGA ACGCGGCGCG
CTCGCTGCGA TACGGCCCAT GATCGAGCCG CACCTGCGCC GGTGA
|
|---|
| Protein sequence | MVELVRVGTR FTWLRGAAFG LQQGALAGEL VLTDEGRAGI VEEMLAAFAD EASTGGERAA
GASGVECLID CILRCVGALQ RRAGVPVSWR SHRALIRTVA DVRVFRVALP SDQPAATERA
LRWVVAEVNR RATGGQAGSK DGRSSQESLE ELDRMLGAHA IPGINPINIA LAAYRAGIPV
GRLLHDVLVL GQGRKARWMR STITDRTSGI GLGIARNKVH TAEVLRAAGL PVPQQVVVRS
PEGAVEAARA LGYPVVVKPA DQEQGAGVQA GLSDDAMVRI AYDAASALSR TILVERHVEG
YTHRLTVFQG RVVRVMRRVA GGVVGDGVSA VATLVERRLE DEIHRRRAQR AGAPLLSLDA
EALDLLARRG MGPASVPAAG EYIRLRRRDN INAGGENRPC ALGDVHPANL QLAVDAAMAL
RLDLAGVDLI IEDVSRSWLE AGGAICEVNG QPQMGGNSHA GVLDAVVREL VGGDGRIPVH
LVVCPDREDW HAGLSARLLQ HGEVDGVSSR HGLVLRGARV SMPFEDALAA AQALLCRADV
GSAACLMSAP DILRLGLPSD VLDSLRVADE TAMSAAERGA LAAIRPMIEP HLRR
|
|---|
| |