| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1971 |
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| Symbol | |
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| ID | 7084439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2222737 |
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| End bp | 2226048 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643698996 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002355618 |
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| Protein GI | 217970384 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00733019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTG TCGATCTGCT TCTGCAGCAG GCTTCGAGTC GCCCGGAGGC CCTCGCCGTG
CGCCATGGCG ATGAAGTGCT CGGCTATGGG GCCTTGGGGC GGAGGGTGTG CTCGGTGGCC
GCGGGCCTGG CGAACGCCGG AGTGGCGCGA GGGGACGTGC TCGCGCTATG TCTGGACGAC
CCCCTCGATC ATCTGGTGGC GTCCTTGGCG GTCGCTCATC GGGGGGCGAC GGTGGTGAGT
GTCCCGCGCA CCCTGCCCGA TGCGTTGCGT GGGCGACTGT TGGCGCTCAC GCGGGCTGGT
CGGGCGCTCG CCGACGACGG TCGTCGAACT GGAGCGGACC TCGGCGGGCT CCCGGTCCTC
GCCTGGTCCA TGCTCGAGAG AAGCCCGCCG TCGATGACGC CCGAGCCGGC GCGCGAGGTG
GCGGATCGGC CGTGGATCTA TGTGACGGGC TCCGGCTCCA CGGGGCGACC CAAGATCATG
CCGGTCACGC ACCGGCAGCA ATGCCTGCGC TCGAGGCTGG GGCCGAGCTG GCTGCCCTAT
GGCGCGCAGG ACGTCTTGTG CTCCATGGTG AGCATGCATT TCTATTCCGC GAAGCAGCGC
TGCCTGGAGG CGATGGCGAT CGGGGCGGGA ATCTTCCTGG ACACCCCCGG CCGCGTGGAC
CTTCGCCGTG AAGTCGCCGA GGGCGAGGTG ACGGTGATCC ACGCCATGGT CTGCCACATC
GAGACCCTCC TGCGTCGGCT TCCGGCGGAG GCGACCGGCG CGTTCGCCCG GCTGCAGGCG
CTGATGGTGG GGGGCTCGAC GGTGTCGATG GCGCTGCGCG ACGAGATCCG GCGACGCTTG
ACCCCCCGCA TCCATGTCTT CTACGGGACG AACGAGAGCC ACACCGCGAC CCTGACTCGA
CTGGACGAGG TTCACCGGAC GAGCGGCGGC GTGGGGCGTC CTTTTCCCGG CATCCGCATC
GAGGTGGTCG ATGAGCGCGG GCAGCCGGTC CCGGCAGGGG TGGACGGACG GGTGCGGATC
GCCTCGCCGA TGGTCATCGA CGGTTATCTC GGTGACGAGG AGGCGAACCG CAAGGCCTTC
GCGGAGGGCT GGTTCTATCC CGGGGACATC GGCCATCTGA CGGCCGACGG ACAGCTGGTG
CACAGAGGGC GCATGGACGA CATGATGATC GTCGGTGGCG TGAATCTCCA TCCAGCCGAG
ATCGAGCAGT GCCTGCGGCG GCATCCGGGC GTGGCCGATG CGCTGGCCAC GCCCCTGCGG
CATCGCGTGC TGCAGGATGT CCCGGTCGCG CTGGTGGTTC CCGAAGCTGG AACGCATCCG
AGCGCGCATG AACTCGTCGC CCATGTCCGC GCAGCCTTGG GGCGCCATGC CCTGCACGAC
GTGATCTGGG TCGACCGCAT CCCGCGGAGC GAACAAGGCA AGGTGCAGCG CGAAGCGCTC
GAGGCGGTTC TGGAGCGCCA CGATTGGGCA CACGAGGGCG GTCGGGCGCA AGGGGCGCGC
CGCCACTGGT CGAGACCGCG TCAGTTGCAG ACCCGCTTCG AGATCGAGTT CGCACCGCCG
ATCGCGCCAG CCACAAACCG TCTGGACGCC TGGATGGCCT TGCTGGGCGA GGACGCCCCA
CTCGGGACGA GGCCGTCCGA GGGGTGCGAA GACGCAGACA CGGCCCGGTA CTGGCTGCAG
CAGGTCCTGC GTCTGGCGCG GCTGTTCCTG CAGTTGGTCC GCGTGCCGGT GTTCGACGTC
TTCGAGCTCA TCGACTGCGC TCCGGTCGAC GAACATCGGC GGCGGTGGCG GGCGGCGTTC
CTGTGTCCGG GACCCGAGTT CGTCTCCGCT ACGGCGTGCA TGGAGGTGGT CGGGATCGCA
TTCCGCATCG CACAGCTTGC ACAGGGCGCG GATCCGGGCA GCCCGCAGGA CCGCGAGCGT
GTCTTCGTGG CCATCGGAGA CGAGCTTCTG CAGCCCCATG GAAAGCTGAT GCCCGCGGGA
AAGTCGACCC TCGAGGTCTT GCGCGCAGCC TATCGGCTGG ATATTCCCTT CCGGCCCCTT
GGAAGGGGCG TGTATCAGCT CGGCTGGGGC AGCAGGGCGA GGCGTATCGA GCGCAGCACG
ACCGATGGCG ACTCGGTCTT CGGCATGCGC TGGACGCACG ACAAATGGAT GGCGTCCGAA
CTGTTGCGTG CGGCCGGACT GCCGGCGCCG GTGAACCGGC TCGTCATGAC GGCGGAAGAA
GCGCGCGCGG CAGCCCGCAG CCTGGGTTAT CCGGTGGTCG TCAAGCCCGT CGATCGGGAT
CGCGGCGAAG GGGTGAGCGT GGATGTGGGC GATGACGAGG GAGTGGCGCG GGCTTACACG
ACGGCTCGTG AATGCTCGCC GGGCAAGCGG GTTCTGGTGG AGCGACAGGC GCCGGGGGTC
TGCCATCGGA TCTTCGTTGC TGCGGGACGT CTGCTGTATG CCGTGAGGCG GCTCCCGGCC
GGCGTGTACG GGAATGGCAG GACTTCGATC GGGGGCCTGG TCGATGCCGA GTGCGCGCGT
CGGATGGGTT TGCCACCGTG GAAGCGCGCG CCGCTTTGCG CGCTGGACGA CAGCGCGCTC
GAGATGCTCG CGCGCCAGGG CCTGGGGCCG GAGGACGTGC CGGGTGCCGG CCGGTTCGTC
GCCTTGCGTC GTATCGAGAC CACGGCCTCG GGGGGCGTGG ATGAGGAAGT CACCCATGCG
CTGCATCCCG AGAACGTGCG TGCCGCGATT GCCGCCGCAC GCCTCTTCGG CCTGGAGGTT
GCCGGGGTGG ACATGATCAG CCCCGACATC ACCGCGCCGT GGCATGCCAA CGGCGCCATC
CTCAACGAGG TGAATTTCGC TCCCCTGCTG GGCGGTGGCG AAATATCGCG GCGCTACGTC
GAGGAATACC TGTTCCGCCT GGTCGATGGG CGTGGGCGGA TTCCCGTCGA GGTATTCGTG
GGCGGGGCGG CCGCCTGGGA GGCGGCTGCA GCGCGCTGGC GGACCTTGCT CCAGGCCGGC
ATGGCCGCGG TCCTGAGCAG TGACGTGCGT ACCCTGGGCG GCGACGGCCA ACCCTTCGGC
CTGGCGGTCG ATGGGCTGCA TGCAAGGGTG CGTGCCTTGA CGCTGCGCGC CGAGGTGGGC
GCGCTGGTCC TTGTCGTGCA GACGCTCGAG CTGCTGCGGA CGGGGATCCC GCTGGATCGG
GTCGACCGCG TCGTCGTGAT CGACGGCGAC ATCCGGACGG CCGGTTCGCC AGCGCGGCAG
GCCGCGGATG CGGAGGTGGC CGGGCTGATC GCCCTGTGCC GCGCCTGGGA CGCCAGCGGG
ACTGCGTCTT GA
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| Protein sequence | MNVVDLLLQQ ASSRPEALAV RHGDEVLGYG ALGRRVCSVA AGLANAGVAR GDVLALCLDD
PLDHLVASLA VAHRGATVVS VPRTLPDALR GRLLALTRAG RALADDGRRT GADLGGLPVL
AWSMLERSPP SMTPEPAREV ADRPWIYVTG SGSTGRPKIM PVTHRQQCLR SRLGPSWLPY
GAQDVLCSMV SMHFYSAKQR CLEAMAIGAG IFLDTPGRVD LRREVAEGEV TVIHAMVCHI
ETLLRRLPAE ATGAFARLQA LMVGGSTVSM ALRDEIRRRL TPRIHVFYGT NESHTATLTR
LDEVHRTSGG VGRPFPGIRI EVVDERGQPV PAGVDGRVRI ASPMVIDGYL GDEEANRKAF
AEGWFYPGDI GHLTADGQLV HRGRMDDMMI VGGVNLHPAE IEQCLRRHPG VADALATPLR
HRVLQDVPVA LVVPEAGTHP SAHELVAHVR AALGRHALHD VIWVDRIPRS EQGKVQREAL
EAVLERHDWA HEGGRAQGAR RHWSRPRQLQ TRFEIEFAPP IAPATNRLDA WMALLGEDAP
LGTRPSEGCE DADTARYWLQ QVLRLARLFL QLVRVPVFDV FELIDCAPVD EHRRRWRAAF
LCPGPEFVSA TACMEVVGIA FRIAQLAQGA DPGSPQDRER VFVAIGDELL QPHGKLMPAG
KSTLEVLRAA YRLDIPFRPL GRGVYQLGWG SRARRIERST TDGDSVFGMR WTHDKWMASE
LLRAAGLPAP VNRLVMTAEE ARAAARSLGY PVVVKPVDRD RGEGVSVDVG DDEGVARAYT
TARECSPGKR VLVERQAPGV CHRIFVAAGR LLYAVRRLPA GVYGNGRTSI GGLVDAECAR
RMGLPPWKRA PLCALDDSAL EMLARQGLGP EDVPGAGRFV ALRRIETTAS GGVDEEVTHA
LHPENVRAAI AAARLFGLEV AGVDMISPDI TAPWHANGAI LNEVNFAPLL GGGEISRRYV
EEYLFRLVDG RGRIPVEVFV GGAAAWEAAA ARWRTLLQAG MAAVLSSDVR TLGGDGQPFG
LAVDGLHARV RALTLRAEVG ALVLVVQTLE LLRTGIPLDR VDRVVVIDGD IRTAGSPARQ
AADAEVAGLI ALCRAWDASG TAS
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