Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1918 |
Symbol | |
ID | 7085687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2163655 |
End bp | 2164389 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698943 |
Product | ABC transporter related |
Protein accession | YP_002355565 |
Protein GI | 217970331 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.269297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGAC CGACGCGCGC CGGCAAGGGC ATCCTGATCG AAGGCCTCAC CAAGCGCTAC GGCAAGGGCG ACACCGCAGT GGATGCCTTG AAGGGCGTGG ACATGCGTGT CGCCCCGGGC GAGGTCGTCG GCCTGATCGG CCCCTCGGGC TCGGGCAAGA GCACGCTGCT GAAGTGCCTC GGTGCGGTCA TCGACCCTAC GGCGGGGCGC ATGACCCTGG GCGAGGAGTG CATCTTCGAC AACGGCTGGA AGGTGCGCGA CCTGCGCGCC CTGCGCCGCG ACCGCATCGG CTTCGTGTTC CAGGCGCCCT ACCTGATCCC CTTCCTCGAC GTCACCGACA ACGTCGCCCT GCTGCCCATG CTCGCCGGCG TGCCGAACGC CGCGGCGCGC GCGCGGGCGC AGGAATTGCT GAGCGCGCTC GACATCTCGC ACCGTGCCGC GGCCATGCCC GCGCAGCTGT CGGGCGGCGA GCAGCAGCGC GTCGCCATCG CCCGCGGCCT GGTCAACCGC CCGCCGGTGA TCCTCGCCGA CGAGCCTACC GCGCCGCTCG ACAGCGTGCG CGCGATGGCG GTGGTGCGCA TCCTCAACGA CATGGCGGCG CAGTTCCAGA CCGCGATCAT CGTGGTGACC CACGACGAGA AGATCATTCC CACCTTCAAG CGCATCTATC ACATCCGCGA CGGGGTGACG CACGAGGAGG CGGGCGAGGG GCGGCTCGTG CGCGAAAGCG CGTGA
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Protein sequence | MDRPTRAGKG ILIEGLTKRY GKGDTAVDAL KGVDMRVAPG EVVGLIGPSG SGKSTLLKCL GAVIDPTAGR MTLGEECIFD NGWKVRDLRA LRRDRIGFVF QAPYLIPFLD VTDNVALLPM LAGVPNAAAR ARAQELLSAL DISHRAAAMP AQLSGGEQQR VAIARGLVNR PPVILADEPT APLDSVRAMA VVRILNDMAA QFQTAIIVVT HDEKIIPTFK RIYHIRDGVT HEEAGEGRLV RESA
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