Gene Tmz1t_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1896 
Symbol 
ID7085665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2140092 
End bp2141375 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content71% 
IMG OID643698921 
Productcysteine desulfurase, SufS subfamily 
Protein accessionYP_002355543 
Protein GI217970309 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGCTC CGTGTGACCC CGGCGCGCAG ACGCCCATCC TGGACCTTGC CGCCGACTTC 
CCCATCTTGT CGCGGCCGTT GCATGGCCGC CGCCTGGCCT ACCTGGACAA CGGCGCCACC
ACGCAGAAGC CCGCCGCGGT GATCGAGGCC GAGGCGCGCT TCTACCGCGA GTCCAACGCC
AACATCCACC GCGGCGTGCA CTGGCTGTCG CAGCACGCCA CCGAACTCTA CGACGGCGCC
CGCGCCACGG TGCAGCGCTT CCTCAACGCC GCGCGCGCCG ACGAGATCGT GTTCACCCGC
GGCACCACCG AGGCGATCAA CCTGGTGGCG CAGAGCTGGG GCCGGCCACG GCTCGCGGCC
GGTGACGAGA TCCTGCTCAG CACCATGGAG CACCACTCAA ACATCGTGCC CTGGCAGCTC
GTGTGCGAGC AGACCGGCGC GGTGCTCAAG GTGATTCCGG TGCGGGACAA CGGCGAGCTC
GACATGGCGG CCTTCGCGGG CCTGCTCGGC GAGCGCACGC GGCTGCTGGC GATCACCCAT
GTGTCGAACG CGCTCGGCAC GGTCAATCCG GTGGCCGAGA TGACGCGGCG CGCGCACGAG
ATGGGCGCGG TCGTGCTCGT GGACGGCGCG CAGGCGGTGG CCCACCAGGC GGTGGACGTG
CAGGCGATCG GATGCGACTT CTACGCCTTC TCGGGCCACA AGCTCTACGG CCCAACCGGC
GTCGGCGCGC TCTACGGCCG CGCCGAGCTG CTGCGCCACA TGCCCCCCTG GCAGGGTGGC
GGCGACATGA TCCGTACCGT CGCCTTCGAC AACACCACCT TCGCCCCGCC GCCGCAGCGC
TTCGAGGCCG GCACGCCCAA CATCGCCGGG GCGATCGCGC TGGCTGCGGC GATCGACTAC
GTCCAAGGCG TCGGGCTCGC GCGCATCCAC GTCCACGAGC AGGCCCTGCT CGACTACGGC
ACGCGCGCGC TCGCCGCCAT CCCCGGGGTA CGCCTGGTCG GCACCGCGGA GCGCAAAGCC
GGCATCCTGT CCTTCCTGGT CGACGGCATC CACCCGCACG ACCTCGGCAC CATCCTCGAC
GCCGAGGGTG TGGCGATCCG CGCCGGGCAC CACTGCGCGA TGCCACTGAT GACGCGCTTC
GGCATCCCCG GCACCGCGCG CGCCTCGCTC GGCCTCTACA ACGGCCTCGC CGACCTCGAC
GCGCTGGTCG CGGCGATCCA CAAGGCGCAG GAACTGTTCG GCACGCGCGG CGGCACGGCG
TCTGGCAACG GGAGAGTGGC ATGA
 
Protein sequence
MNAPCDPGAQ TPILDLAADF PILSRPLHGR RLAYLDNGAT TQKPAAVIEA EARFYRESNA 
NIHRGVHWLS QHATELYDGA RATVQRFLNA ARADEIVFTR GTTEAINLVA QSWGRPRLAA
GDEILLSTME HHSNIVPWQL VCEQTGAVLK VIPVRDNGEL DMAAFAGLLG ERTRLLAITH
VSNALGTVNP VAEMTRRAHE MGAVVLVDGA QAVAHQAVDV QAIGCDFYAF SGHKLYGPTG
VGALYGRAEL LRHMPPWQGG GDMIRTVAFD NTTFAPPPQR FEAGTPNIAG AIALAAAIDY
VQGVGLARIH VHEQALLDYG TRALAAIPGV RLVGTAERKA GILSFLVDGI HPHDLGTILD
AEGVAIRAGH HCAMPLMTRF GIPGTARASL GLYNGLADLD ALVAAIHKAQ ELFGTRGGTA
SGNGRVA