Gene Tmz1t_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1858 
Symbol 
ID7084281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2091820 
End bp2093172 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content70% 
IMG OID643698881 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002355506 
Protein GI217970272 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.840288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG CCATTTTCGG TACCGGCTAC GTCGGCCTGG TCAGCGGCGC GTGCCTCGCG 
GAAGTCGGCC ACGACGTGCT GTGCATGGAC GTCGACCAGG CCAAGATCGA CCAGCTGCGC
GCCGGCACCA TCCCGATCTG GGAGCCCGGC CTGCAGCCGA TCGTCGAGCG CAACCTCGCC
GAGGGCCGCC TGCGCTTCAC CACCGATGCG GCCGAGGCGG TGCGCCACGC CGAGGTGCAG
TTCATCGCCG TCGGCACCCC GCCCGACGAG GACGGCTCAG CCGACCTGCA GTACGTGCTC
GCGGTCGCCG AGGAGATCGC CCGTCACATG CCGGGCTACC GGGTGATCGT GAACAAATCC
ACCGTACCCG TCGGCACCGC CGGGAAGGTG CAGGAGCGCA TCGCGCAGGT ACTCGCCGAG
CGCGGCGAGA CGGTCGCCTT CGACGTCGTC TCCAACCCCG AATTCCTCAA GGAGGGCGCG
GCGGTCGCCG ACTTCCTCAA GCCCGACCGC ATCCTCGTCG GCACCCGCTC GGCGCGCGCG
CAGGAGCGTA TGCGCGAGAT CTACGAGCCC TTCAACCGCA ACCACGAGCG CACCCTGTTC
ACCGACGTGC GCAGCGCCGA GCTCACCAAG TACGCCGCCA ATGCGATGCT CGCCACCCGC
ATCAGCCTCA TGAACGAGCT CGCCAACCTC GCCGAGCGCC TCGACGCCGA CATCGAGGAG
GTGCGCAAGG GCATCGGCGC CGACCCGCGC ATCGGCTACC ACTTCATCTA CCCCGGCTGC
GGCTATGGCG GCTCGTGCTT CCCCAAGGAC GTCCGGGCGC TCGGTCGCAT CGCCGAGCAG
GTAGGCTACG ACGCGCCGCT GCTGCGGGCG GTGGAGGCCG TGAACGAGCG CCAGAAGAAC
ACCTTGTTCG CCAAGCTCGC CGACCACTTC GGCGGCGCCG GCGGACTCGC CGGACGCACG
ATCGCGGTCT GGGGCCTCGC CTTCAAGCCC AACACCGACG ACCTGCGCGA AGCCCCCAGC
CGCAGCCTGA TCGAGGCGCT GTGGCAACAC GGCGCGCGCG TGCAGGCCTA CGACCCGGTG
GCGATGGACG AGATGCGGCG GCTCTATGGC CCGCGCGCCG ACCTGGCGCT GGCGAGCAAC
AAGTACAGCG TGCTCGAAGG CGCGGACGCG CTGGCGATCT GCACCGAGTG GCAGCAGTTC
CGCGCGCCCG ATTTCGACGA GATGGCGTCC CTGCTTCAGG CCAAGGTCAT CGCCGACGGG
CGCAACCTGT ACCCACCGGA CCGCCTGCGC GCCGCCGGCT GGCACTACTA CGGCATCGGC
CGACCCGAGC GCCCCCAAGC CGCAGTCCCG TAG
 
Protein sequence
MKLAIFGTGY VGLVSGACLA EVGHDVLCMD VDQAKIDQLR AGTIPIWEPG LQPIVERNLA 
EGRLRFTTDA AEAVRHAEVQ FIAVGTPPDE DGSADLQYVL AVAEEIARHM PGYRVIVNKS
TVPVGTAGKV QERIAQVLAE RGETVAFDVV SNPEFLKEGA AVADFLKPDR ILVGTRSARA
QERMREIYEP FNRNHERTLF TDVRSAELTK YAANAMLATR ISLMNELANL AERLDADIEE
VRKGIGADPR IGYHFIYPGC GYGGSCFPKD VRALGRIAEQ VGYDAPLLRA VEAVNERQKN
TLFAKLADHF GGAGGLAGRT IAVWGLAFKP NTDDLREAPS RSLIEALWQH GARVQAYDPV
AMDEMRRLYG PRADLALASN KYSVLEGADA LAICTEWQQF RAPDFDEMAS LLQAKVIADG
RNLYPPDRLR AAGWHYYGIG RPERPQAAVP