Gene Tmz1t_1736 details

Gene Information

• Locus tag: Tmz1t_1736
• ID: 7085702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 1956668
• End bp: 1958560
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643698755
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002355385
• Protein GI: 217970151
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.195499
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACAATC TCTTCAAGAA TCTCGCGATC TGGATGGTTA TCGGCGTCGT GCTGATGACG 
GTATTCAACC AGTTCAACAC GCGCCAGACG CCGGCCAGCA CCATGGAGTA TTCCCAGTTC 
CTGGAGGAGG CCAAGGCGGG ACGGATCGCG CGCGCGACCG TCGATGGCCG CGTGCTCAAG 
GCCACCACCC AGGAAGGGCG CACGATCACG GTGTATACGC CGGGCGTGCA GGACATCTGG 
ATGATTTCAG ACCTGATGCG CTACGGCGTT CAGATCAACG CCAGCAAGCC CGAGGAGGAG 
CAGTCCTTCC TCGCCAGCGT ATTCGTGTCG TGGTTCCCGA TGTTGCTGCT GATCGGCGTG 
TGGATCTTCT TCATGCGCCA GATGCAGGGC GGGGGCAAGG GCGGGGCGTT CTCCTTCGGC 
AAGAGCAAGG CGCGCATGCT CGACGAGTCG GCCAATTCGG TGACCTTTGC CGACGTTGCC 
GGCTGCGACG AGGCCAAGGA AGAAGTTGCC GAGCTGGTCG AGTTCCTGCG TGATCCGTCC 
AAGTTTCAGA AGCTCGGCGG CCGCATTCCC AAGGGCGTGC TGATGGTCGG TTCGCCGGGT 
ACCGGCAAGA CCCTGCTCGC CAAGGCGATC GCCGGAGAGG CCAAGGTGCC CTTCTTCTCG 
ATCTCCGGCT CCGACTTCGT CGAGATGTTC GTCGGCGTAG GCGCGGCGCG CGTGCGCGAC 
ATGTTCGAGC AGGCCAAGAA GCAGGCGCCC TGCATCATCT TCATCGACGA GATCGACGCG 
GTCGGCCGCC AGCGTGGTGC GGGTCTGGGC GGCGGCAATG ACGAGCGCGA GCAGACGCTC 
AACCAGTTGC TGGTCGAAAT GGACGGTTTC GAGGGCCAGA CCGGCGTGAT CGTGATCGCC 
GCGACCAACC GCCCCGACGT GCTCGACCCG GCTCTGCTGC GCCCGGGCCG CTTCGACCGC 
CAGGTGGTGG TGGCGCTGCC CGACATCCGT GGTCGCGAGC AGATTCTCAA GGTGCACATG 
CGCAAGGTGC CGATCGCGCC CGACGTCGAT CCGCAGGTGC TGGCGCGCGG CACGCCGGGC 
TTTGCCGGTG CCGACCTCGC CAACCTGGTG AACGAGGCTG CGCTGTTCGC CGCGCGCGCC 
AACAAGCGTC TGGTCGACAT GGAGGACTTC GAGCGCGCCA AGGACAAGAT CATGATGGGC 
GCCGAGCGCC GCTCGGTGGT CATGCCCGAG GAGGAGCGCC GCAACACCGC CTACCACGAG 
TCCGGTCACG CGGTGGTGGC GCGTCTGCTC GACAAGACCG ATCCGGTGCA TAAGGTGACC 
ATCATCCCGC GCGGCCGTGC GCTGGGCGTG ACCATGCAGT TGCCGACCGA GGATCGCTAC 
AGCCAGGACC GCGATCGACT GCTGCAGACC ATCGCCGTGC TGTTCGGTGG CCGCATCGCC 
GAAGAGATCT TCATGAAGCA GATGACGACC GGTGCGTCGA ACGACTTCGC CCGTGCCACT 
GACCTCGCGC GCCGGATGGT GACGCAGTGG GGCATGTCCG ACACGCTCGG ACCGATGGTG 
TATGGCGAGG AGGAGGGCGA GATCTTCCTC GGCCGCCAAG TCACCACGCA CCGCAACGTG 
TCCGAGGCGA CGATGCAGAA GGTCGACGCG GAGATCCGCC GCATCATCGA TCAGCAGTAC 
TCGCTGGCGC GGCGCTTGCT CGAAGAGAAC AGCGACAAGG TCGAGGCGAT GACGGCCGCG 
TTGCTGGAAT GGGAAACCAT CGACGCCGAG CAGGTGAATG ACATCATGGC CGGCCGCCCG 
CCGCGTCCGC CGAAGCCGGC ATCGGCGCCG TCCAGCCGTC CGAAGGACGA CGCGCCGGGT 
GCGGCGCCCA CCGCGCCAGC ACCTGCCGCC TGA 

 

Protein sequence

MNNLFKNLAI WMVIGVVLMT VFNQFNTRQT PASTMEYSQF LEEAKAGRIA RATVDGRVLK 
ATTQEGRTIT VYTPGVQDIW MISDLMRYGV QINASKPEEE QSFLASVFVS WFPMLLLIGV 
WIFFMRQMQG GGKGGAFSFG KSKARMLDES ANSVTFADVA GCDEAKEEVA ELVEFLRDPS 
KFQKLGGRIP KGVLMVGSPG TGKTLLAKAI AGEAKVPFFS ISGSDFVEMF VGVGAARVRD 
MFEQAKKQAP CIIFIDEIDA VGRQRGAGLG GGNDEREQTL NQLLVEMDGF EGQTGVIVIA 
ATNRPDVLDP ALLRPGRFDR QVVVALPDIR GREQILKVHM RKVPIAPDVD PQVLARGTPG 
FAGADLANLV NEAALFAARA NKRLVDMEDF ERAKDKIMMG AERRSVVMPE EERRNTAYHE 
SGHAVVARLL DKTDPVHKVT IIPRGRALGV TMQLPTEDRY SQDRDRLLQT IAVLFGGRIA 
EEIFMKQMTT GASNDFARAT DLARRMVTQW GMSDTLGPMV YGEEEGEIFL GRQVTTHRNV 
SEATMQKVDA EIRRIIDQQY SLARRLLEEN SDKVEAMTAA LLEWETIDAE QVNDIMAGRP 
PRPPKPASAP SSRPKDDAPG AAPTAPAPAA