Gene Tmz1t_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1720 
Symbol 
ID7084140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1936980 
End bp1937678 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID643698739 
ProductOmpA/MotB domain protein 
Protein accessionYP_002355369 
Protein GI217970135 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.969233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAC AATCCAAGAA GCAGATGCTC ATGCTGGCCG CCATCGCCTC GATCGGCCTG 
TCCGCCCCGA GCGCTTTCGC TCAGGTCAGC GACGTCGTCG TCGCCGGCAA GGGTGAAATC
CCCTACGTGA TCGACGCGCG CAACGTCGTC GCTCGCAGCG GCACCGGCCT GTGCTGGCGC
ACCGGCTACT GGAGCCCCGC CGCCGCCTCG ACCGCCCTCG CCGGCGACCT GCCGGTCGGC
TGCGCTTGCG ACAAGGACAT CGTCCCCGCC GACAAGTGCA CCGTGAAGGC TGCTGCCGCG
GCTCCGGGTC CGAAGCCCAC CGCCGACAAG GTCAAGCTGT CGGCCGACGC CCTGTTCGAC
TTCGACAAGG CCGTCCTGAA GGCTGAAGGC AAGGCCAAGC TCGACCAACT CGCCGCCCAG
GCCAAGTCGC TCAAGCTGGA AGTGATCCTC GCCGTCGGCC ACACCGACCG CCTGGGTTCC
AACACCTACA ACCAGCGCCT GTCCGAGCGT CGCGCCGCCG CCGTCAAGAC CTACCTGGTC
TCGAAGGGCG TCGATGCCAA CCGCGTCTAC ACCGAAGGCA AGGGCGAAAC CCAGCCCGTG
ACCGGCAACA AGTGCGACAA GGTCGGTGGC CGCGCCGCGC AGATCTCCTG CCTGCAGCCG
GATCGTCGCG TCGAAGTGGA AGTCATCGGC TCCAAGTAA
 
Protein sequence
MIKQSKKQML MLAAIASIGL SAPSAFAQVS DVVVAGKGEI PYVIDARNVV ARSGTGLCWR 
TGYWSPAAAS TALAGDLPVG CACDKDIVPA DKCTVKAAAA APGPKPTADK VKLSADALFD
FDKAVLKAEG KAKLDQLAAQ AKSLKLEVIL AVGHTDRLGS NTYNQRLSER RAAAVKTYLV
SKGVDANRVY TEGKGETQPV TGNKCDKVGG RAAQISCLQP DRRVEVEVIG SK