Gene Tmz1t_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1716 
Symbol 
ID7084136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1930764 
End bp1932203 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content70% 
IMG OID643698735 
Productiron-sulfur cluster binding protein 
Protein accessionYP_002355365 
Protein GI217970131 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACG TCGCCGACAC CCCCGCGCAG CCGATCGCCT TCACCCGCAA CGCGCGCGAG 
GCGCTCGCCG ACGCGCAGCT GCGGCGCAAC TTCCGCGGCG CCATGGATGC GCTGATGGAC
AAGCGCCGCA ACCAGTTTCC CGACGGCGAC GAGCTCGAGC GCCTGCGCGC CTTCGGCAAC
CGCGTGCGGG CGCGCGCGCT GTCCAAGCTG CCCGATCTGC TCGAGCGCCT CGAGGCCAAT
CTCGTCCGCA ATGGTGTGCA GGTGCACTGG GCGGAGACGG TGGAGGAGGC CAACGCCATC
GTGCATGGCA TCGCCGAGCG CCACGCGGCG AGGAAGGTGA TCAAGGGCAA GTCGATGGTG
TCCGAGGAAA TGGAGATGAA CCATTACCTC GGTGCGCGCG GCGTCGACTG CCTCGAATCC
GACATGGGCG AGTTCATCGT GCAGCTGCGC GCGGAGAAGC CCTCGCACAT CATCATGCCG
GCGATCCACC TCAACGCCGG CCAGGTCGCG AAGCTGTTCC ACGACAAGCT CGCGGTCGAG
TACACCGAGG ACGTCGATCG CCTCATCCAG ATCGGCCGCG AGACCTTGCG GCGCAACTTC
TTCGAGGCCG ACATCGGCGT CTCGGGGGTG AACTTCGCGA TCGCCGAGAC CGGCACGCTG
CTGCTGGTGG AAAACGAGGG CAACGGCCGC ATGTCGACCA CGGTGCCGCC GGTGCACATC
GCCGTCACCG GCATCGAGAA GGTGGTCGAG AACCTGCGCG ACGTGATCCC GCTGCTGTCG
CTGCTGACGC GCTCGGCCAC CGGCCAGCCG ATCACCACCT ACGTCAACAT GATCTCCGGC
CCGCGCAAGG CCGACGAGCT CGACGGCCCG CAGGAAGTCC ACCTGGTCCT GCTCGACAAC
GGCCGCAGCC AGGCCTTCGC GGACGGCGAG CTGCGCCAGA CGCTGAACTG CATCCGCTGC
GGCGCGTGCA TGAACCACTG CCCGGTGTAT ACGCGGATCG GCGGCCACGC GTACGGCACG
GTGTATCCCG GGCCGATCGG CAAGATCGTC ACCCCGCACA TGCTCGGGCT GGAGACCACC
CGCGACCTGC CCACGGCCTC GTCGATGTGC GGCGCCTGCG GCGAGGTGTG CCCGGTGAAG
ATCCCCATCC CGTCCCTGCT GCGCCGCCTG CGCGAGGAGG CGGTGCGTGC GCCCGCGGCC
GAGCCGCATC ACGTGCGCGG GCAGGGCGCC AAGCACTCCA GGAAGGAGAC CCTGGTGTGG
AGGGTGTGGC GCACGCTCAA CACCTCTCCG GGCCTGTACC GCGCGGCGAT GTACGCGGGC
ACCCGCCTGC GCGGGCTGAT GCCGGCCGAC ATCGGGCCGT GGACGCGCTA CCGCAGCGCG
CCGAAACCGG CCGCGCGCAG CCTGCACGAG CTCGCCCGCG AGCATCTGGG CGAGCAATGA
 
Protein sequence
MSHVADTPAQ PIAFTRNARE ALADAQLRRN FRGAMDALMD KRRNQFPDGD ELERLRAFGN 
RVRARALSKL PDLLERLEAN LVRNGVQVHW AETVEEANAI VHGIAERHAA RKVIKGKSMV
SEEMEMNHYL GARGVDCLES DMGEFIVQLR AEKPSHIIMP AIHLNAGQVA KLFHDKLAVE
YTEDVDRLIQ IGRETLRRNF FEADIGVSGV NFAIAETGTL LLVENEGNGR MSTTVPPVHI
AVTGIEKVVE NLRDVIPLLS LLTRSATGQP ITTYVNMISG PRKADELDGP QEVHLVLLDN
GRSQAFADGE LRQTLNCIRC GACMNHCPVY TRIGGHAYGT VYPGPIGKIV TPHMLGLETT
RDLPTASSMC GACGEVCPVK IPIPSLLRRL REEAVRAPAA EPHHVRGQGA KHSRKETLVW
RVWRTLNTSP GLYRAAMYAG TRLRGLMPAD IGPWTRYRSA PKPAARSLHE LAREHLGEQ